Affine Alignment
 
Alignment between PCDHB7 (top ENST00000231137.6 793aa) and PCDHGA2 (bottom ENST00000394576.3 932aa) score 31046

003 ARVERAVQKRQVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRA 061
    | +++    |+++ ||  |   | | |  +|| | || +||+|+ |+||||||    |  
002 AALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAE 061

062 RGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAEL 121
    +| ||||    |+  |+  +| |+   ++||||||    ||+| | +|||    |+  |+
062 QGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEV 121

122 WVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHIN 181
     + ||||+|| |   |+ ||| |+||||    |++| |+||| |+|  | ++|| +| ++
122 EITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLD 181

182 VHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPD 241
    |    +|| |||||| + |||||     | | | ||| |  |||+ + + ||| ||||| 
182 VRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPV 241

242 FVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSL 301
    | +  |++ +|||+ ||+ +++|+| | | |   ++ |    +     + |++  ||| |
242 FTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGEL 301

302 HLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS- 360
     +   ||||    + + |+|+|| ||  +  |+| | |+||| ||  ++| || ++|+| 
302 TIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSL 361

361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
    | |++ +| + ||||| |  | ||+ +|+|| |+ ||+|+| ||| + ||||+ + ||||
362 PGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNIT 421

421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
    +|  | | | | |+ +| + |+|+|||||||++|||+ ++ |||     + ||+| | ||
422 LTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDS 481

481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
      || | ||         ||+| +|||+| | |+|||| ||| |+  +  | | | |+| 
482 NDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPP 541

541 LSSEALVRVLVLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQN 599
    |||   + + ||| |||+| +|||      +   |  ||+|||||||||||||| |||||
542 LSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601

600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLH 659
    ||||| ||||+||||| |  | ||||||| | +||| || ||| ++|+|+|| ||| || 
602 AWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLT 661

660 VLLVDGFSQPYLRL----PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCR-- 713
    | + |        |    | | |+ ++ ||+|||||+|+|| +||  |++ +| || |  
662 VAVADRIPDILADLGSLEPSAIPNDSD-LTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

714 RSRAAPVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 767
    +||       |+  |    | | + |     |+| +|| ||  |  +   | +|
721 KSRLLQASGGSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773