Affine Alignment
 
Alignment between PCDHB10 (top ENST00000239446.6 800aa) and PCDHGA2 (bottom ENST00000394576.3 932aa) score 30723

011 QRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDD 070
    ++ ||  ||   +  | +|  |||| || ++|||| |+||||||    || +| |+||  
011 RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 070

071 NKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHA 130
      |   |+  +|+|+|  ++|||+||    ||+| | ||++|   ||  |+ + ||||+|
071 RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130

131 PVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMI 190
    | |  +|  ||||| |  |    |+ | | | | | +| | ++||  | +++  | +|  
131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190

191 YPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQ 250
    ||||||+++|||||+    | | | ||| |  |||| + + ||| ||||| | |  |   
191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250

251 APENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYE 310
     |||+ +|  |+ | | | | |  |+| |    +       |++   |||+ + + ||||
251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310

311 LVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS-PETPLAVFK 369
        ++|+|+| || ||  | +|+| ||| ||| ||  ++| ++||+|+| | | + +| 
311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370

370 INDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTP 429
    ++|||||+|    | + |+||| |+ ||+|+| |+|  |||||  + ||||+|  | | |
371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430

430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
     | |+ +| + |+|+|||||||++|||+ ++ |||     + ||+| | ||  || ||||
431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490

490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRV 549
             ||+| +|||+| | |+|||| ||| |+  +  | | | |+| ||    + +
491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550

550 LVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
     ||| |||+| +|||      +   || ||+|||||||||||||| |||||||||| |||
551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610

609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668
    |+||||| |  | ||||||| | +||| |  ||| ++|+|+|| ||| || + + |    
611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670

669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGR 726
        |    |+    ++| ||+|||||+|+|| +||  |++ +| || |  +||      
671 ILADLGSLEPSAIPNDSD-LTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729

727 CSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
     |+  |    | | | |     |+| +|| ||     |   | +|  +|
730 GSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYAD 777