Affine Alignment
 
Alignment between ZNF554 (top ENST00000317243.10 538aa) and GLI4 (bottom ENST00000340042.2 376aa) score 12901

322 KPFECHQCGKVFNRRHSLSEHQRIHTGEKPYECQECGRAFTHSSTLTRHLRTHTGEKPYG 381
    ||  |  ||| |     | +||||||||||| | |||+ |   |   +| | ||||||| 
181 KPHRCEACGKSFKYNSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYE 240

382 CGECGKAFNRISSLTQHQRIHTGEKPYKCEDCGKSFCQSSYLILHKRTHTGEKPYECSEC 441
    ||+||+||+  |  ||| ||| ||||||| +||++| ||| |+ |+| ||||||| ||+|
241 CGQCGRAFSHSSHFTQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQC 300

442 GKAFSDRSSLNQHERTHTGENPYECKQCGRAFSQRSSLVRHERTHTGEKPYRCQECGKAF 501
    ||||   | | +|+| |||| ||||  ||+||  ||   || ||||||||+ |  |||||
301 GKAFIWSSVLIEHQRIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAF 360

502 SQSSSLVTHQKTH 514
     ||| |+ ||+ |
361 GQSSQLIQHQRVH 373