Affine Alignment
 
Alignment between ZKSCAN4 (top ENST00000377294.3 545aa) and ZNF79 (bottom ENST00000342483.5 498aa) score 13490

280 EHGKICHLREDIAQIPTHAEAGEQEGRLQRKQKNAIGSRRHYCHECGKSFAQSSGLTKHR 339
    +| |  |  |   +     +|  |   | + |+   | + + | |||++|+|++ ||||+
210 QHQK-SHTGEKPYECSECGKAFSQSSSLIQHQRIHTGEKPYKCSECGRAFSQNANLTKHQ 268

340 RIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQRTHT 399
    | ||||||| | +| | |   |||| |||+||||||||| +||| | ||+||  ||||||
269 RTHTGEKPYRCSECEKAFSDCSALVQHQRIHTGEKPYECSDCGKAFRHSANLTNHQRTHT 328

400 GEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIH-GDKN 458
    |||||+| +||| ||   + ++| +||||||||+|  ||||| ++++|  ||| | |+| 
329 GEKPYKCSECGKAFSYCAAFIQHQRIHTGEKPYRCAACGKAFSQSANLTNHQRTHTGEKP 388

459 VQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNRSLIEHQKIHTGEKPYQCD 518
     +  | |+++          +       |||||| + |+ + +|| |  ||||||||+|+
389 YKCSECGKAFSQSTNLIIHQKTHTGEKPYKCNECGKFFSESSALIRHHIIHTGEKPYECN 448

519 TCGKGFTRTSYLVQHQRSHVGKK 541
     ||| | ++| | |||| | | |
449 ECGKAFNQSSSLSQHQRIHTGVK 471