Affine Alignment
 
Alignment between ZKSCAN4 (top ENST00000377294.3 545aa) and ZNF649 (bottom ENST00000354957.8 505aa) score 10963

217 SQGLLKMEDVALTLT-PGWTQLDSSQVNLYRDEKQENHSSLVSLG-----GEIQTKSRDL 270
    +|  | +||||+  |   |  |  +| +||||   ||+|+|||+|      +  ||    
004 AQESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVSVGYQAGKPDALTKLEQG 063

271 PPVKKLPEK---------------------------------EHGKI------------- 284
     |+  | ++                                 |||+              
064 EPLWTLEDEIHSPAHPEIEKADDHLQQPLQNQKILKRTGQRYEHGRTLKSYLGLTNQSRR 123

285 -------------CHLREDIAQIPTHAEAGEQEGRLQRK------QKNAIGSRRHYCHEC 325
                   | ++  |+||  |  |    +  |      |+     + | | +|
124 YNRKEPAEFNGDGAFLHDNHEQMPTEIEFPESRKPISTKSQFLKHQQTHNIEKAHECTDC 183

326 GKSFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEECGKVF 385
    ||+| + | ||+|+|||||+||+ |  ||| |     |  |+| | ||||+ |  ||| |
184 GKAFLKKSQLTEHKRIHTGKKPHVCSLCGKAFYKKYRLTEHERAHRGEKPHGCSLCGKAF 243

386 SHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNS 445
         | +|+| | ||||| | +||| | +   | || +|||| ||+||+ ||+|| | |
244 YKRYRLTEHERAHKGEKPYGCSECGKAFPRKSELTEHQRIHTGIKPHQCSECGRAFSRKS 303

446 HLLRHQRIH-GDKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNRSLIE 504
     |+ ||| | |+|     | |+ +  +|              | | +| ++|++   |+ 
304 LLVVHQRTHTGEKPHTCSECGKGFIQKGNLNIHQRTHTGEKPYGCIDCGKAFSQKSCLVA 363

505 HQKIHTGEKPYQCDTCGKGFTRTSYLVQHQRSHVGKK 541
    ||+ |||+ |+ |  ||+  ++ | |++||+ | |+|
364 HQRYHTGKTPFVCPECGQPCSQKSGLIRHQKIHSGEK 400