Affine Alignment
 
Alignment between ZKSCAN4 (top ENST00000377294.3 545aa) and ZNF736 (bottom ENST00000423484.3 427aa) score 11704

219 GLLKMEDVALTLTP-GWTQLDSSQVNLYRDEKQENHSSLVSLG----------------- 260
    |+|   |||+  +|  |  |||+|  ||||   ||+ +|||||                 
002 GVLTFRDVAVEFSPEEWECLDSAQQRLYRDVMLENYGNLVSLGLAIFKPDLMTCLEQRKE 061

261 ---------------GEIQTKSRDLP------PVKKLPEKEHGKI----CHLREDIAQI- 294
                   |     +  ||        +|+  +++|       ||++|   + 
062 PWKVKRQEAVAKHPAGSFHFTAEILPDHDIKDSFQKVILRKYGSCDLNNLHLKKDYQSVG 121

295 -----------------PTHAEA------------------------------GEQEGR- 306
                      ||++                                |+ |+ 
122 NCKGQKSSYNGLHQCLSATHSKTCQCNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD 181

307 ------LQRKQKNAIGSRRHYCHECGKSFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGS 360
            | +|     | + | ||||+| + | ||+|+|+|||||||+|| |||||  |
182 CRLFSDFTRHKKIHTVERCYKCEECGKAFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCS 241

361 SALVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSLL 420
    | || |+| |||++||+|||||| |   |+|  |+| |||||||+|++| | +     | 
242 STLVKHKRNHTGDRPYKCEECGKAFKCFSDLTNHKRIHTGEKPYKCEECNKAYRWFSDLA 301

421 EHHKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIH-GDKNVQNPEHGESWESQGR--TESQ 477
    +|  ||||+||| || |||||+  | | +|+||| |+|     | |+++          +
302 KHKIIHTGDKPYTCNECGKAFKWFSALSKHKRIHTGEKPYICEECGKAFTRSSTLFNHKR 361

478 WENTEAPVSYKCNECERSFTRNRSLIEHQKIHTGEKPYQCDTCGKGFTRTSYLVQHQRSH 537
        | |  ||| || ++|     |  |++||||||||+|+ |||  +  |+|++|+| |
362 IHMEERP--YKCEECSKTFKCFSDLTNHKRIHTGEKPYKCEECGKASSWFSHLIRHKRIH 419

538 VGKK 541
      +|
420 TREK 423