Affine Alignment
 
Alignment between ZKSCAN4 (top ENST00000377294.3 545aa) and ZNF234 (bottom ENST00000426739.7 700aa) score 11837

322 CHECGKSFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEEC 381
    | |||+ | ||| |  |+ ||||||||+||+||| |   + | || |+||||||| ||||
458 CEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEEC 517

382 GKVFSHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAF 441
    ||||| +|+|+ ||| |+||||++|++|||+||+|  |  | |+|||||||+|  ||| |
518 GKVFSQASHLLTHQRVHSGEKPFKCEECGKSFSRSAHLQAHQKVHTGEKPYKCGECGKGF 577

442 RRNSHLLRHQRIH-GDKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNR 500
    + + +|  |||+| |+|     | |+ +      +           |||+ | + |+|+ 
578 KWSLNLDMHQRVHTGEKPYTCGECGKHFSQASSLQLHQSVHTGEKPYKCDVCGKVFSRSS 637

501 SLIEHQKIHTGEKPYQCDTCGKGFTRTSYLVQHQRSH 537
     |  |+++|||||||+|+ ||| |+  | || | + |
638 QLQYHRRVHTGEKPYKCEICGKRFSWRSNLVSHHKIH 674