Affine Alignment
 
Alignment between TRAV3 (top ENST00000390425.2 114aa) and TRAV1-2 (bottom ENST00000390423.2 106aa) score 2090

006 ISMLAMLFTLSGLRAQSVAQPEDQVNVAEGNPLTVKCTYSVSGNPYLFWYVQYPNRGLQF 065
    + +| +   + |   |++ ||  ++   ||  + + |||  ||   |||| |+      |
004 VFLLYVSMKMGGTTGQNIDQP-TEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTF 062

066 LLKYITGDNLVKGSYGFEAEFNKSQTSFHLKKPSALVSDSALYFCA 111
    |   +      ||   | +  ++|+   +|      + ||| | ||
063 LSYNVLDGLEEKGR--FSSFLSRSKGYSYLLLKELQMKDSASYLCA 106