Affine Alignment
 
Alignment between TRAV3 (top ENST00000390425.2 114aa) and TRAV26-2 (bottom ENST00000390460.1 109aa) score 2109

006 ISMLAMLFTLSGLRAQSVAQPEDQVNVAEGNPLTVKCTYS-VSGNPYLFWYVQYPNRGLQ 064
    ++ + +| +|  +      || + +   |  |+ + | +| +||  |+ || | |++| +
004 VTSITVLLSLGIMGDAKTTQP-NSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPE 062

065 FLLKYITGDNLVKGSYGFEAEFNKSQTSFHLKKPSALVSDSALYFCAVRD 114
    +++  +| +   + +    ||  || |   |    | + |+|+|+| +||
063 YVIHGLTSNVNNRMASLAIAEDRKSST---LILHRATLRDAAVYYCILRD 109