Affine Alignment
 
Alignment between PCDHGA2 (top ENST00000394576.3 932aa) and PCDHB7 (bottom ENST00000231137.6 793aa) score 31046

002 AALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAE 061
    | +++    |+++ ||  |   | | |  +|| | || +||+|+ |+||||||    |  
003 ARVERAVQKRQVLFLCVFLGMSW-AGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRA 061

062 QGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEV 121
    +| ||||    |+  |+  +| |+   ++||||||    ||+| | +|||    |+  |+
062 RGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAEL 121

122 EITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLD 181
     + ||||+|| |   |+ ||| |+||||    |++| |+||| |+|  | ++|| +| ++
122 WVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHIN 181

182 VRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPV 241
    |    +|| |||||| + |||||     | | | ||| |  |||+ + + ||| ||||| 
182 VHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPD 241

242 FTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGEL 301
    | +  |++ +|||+ ||+ +++|+| | | |   ++ |    +     + |++  ||| |
242 FVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSL 301

302 TIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSL 361
     +   ||||    + + |+|+|| ||  +  |+| | |+||| ||  ++| || ++|+| 
302 HLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS- 360

362 PGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNIT 421
    | |++ +| + ||||| |  | ||+ +|+|| |+ ||+|+| ||| + ||||+ + ||||
361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420

422 LTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDS 481
    +|  | | | | |+ +| + |+|+|||||||++|||+ ++ |||     + ||+| | ||
421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480

482 NDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPP 541
      || | ||         ||+| +|||+| | |+|||| ||| |+  +  | | | |+| 
481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540

542 LSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
    |||   + + ||| |||+| +|||      +   |  ||+|||||||||||||| |||||
541 LSSEALVRVLVLDANDNSPFVLYP-LQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQN 599

602 AWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLT 661
    ||||| ||||+||||| |  | ||||||| | +||| || ||| ++|+|+|| ||| || 
600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLH 659

662 VAVADRIPDILADLGSLEPSAIPNDSD-LTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
    | + |        |    | | |+ ++ ||+|||||+|+|| +||  |++ +| || |  
660 VLLVDGFSQPYLRL----PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCR-- 713

721 KSRLLQASGGSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
    +||       |+  |    | | + |     |+| +|| ||  |  +   | +|
714 RSRAAPVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 767