Affine Alignment
 
Alignment between PCDHGA7 (top ENST00000518325.2 932aa) and PCDHB9 (bottom ENST00000316105.7 797aa) score 31616

033 YSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTAGRIDR 092
    |||+|||+||||| ++||||||   ||| || |++|    |   |+  +|+|+|  ++||
033 YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDR 092

093 EEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTAPGVRF 152
    |++|     |++ | |||+|   +|  ++ + ||||+ | |  +|+ +|| |||| |  |
093 EKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAF 152

153 PLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERVHHLVL 212
     |  | ||| | ||+|+| +| |  | + +   |+   ||||||++ |||||+    | |
153 RLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTL 212

213 TASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEG 272
    || ||| | || |+ |++ |+||||+ | |+   |+   ||| |||+ ++ | | | | |
213 TALDGGSPSRSGTSTIRIVVLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSG 272

273 VNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGSLTKAK 332
    || ||+|||   +  +   | +|  +|||   | ||||    |++ +|| || |   +  
273 VNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCT 332

333 VLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPF 392
    ||| ||| ||| ||+ ++|||+|+ |++| | |+|+| ++|||||+||+  | + +||||
333 VLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGKTICYVQDNLPF 391

393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452
     |+ |+||+| |+|   ||||+ + ||||+  || ||| |  |  | +||+| ||| | |
392 FLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAF 451

453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSDTG 512
      +||++++ |||     |  |+| | ||  |||+||||        |++| ||||+| |
452 TQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511

513 VLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPALPTDGS 572
     |+||+| ||| |+    || | | | | |||   + + ||| ||| | +||| |    +
512 HLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP-LQNGSA 570

573 TGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTGEVRTARAL 632
       || ||+|||||||||||||| |||||||||| ||||+||||| |  + ||||||| |
571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630

633 LDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNYDLTLY 692
     +||| |  ||| |+|+|+|| ||| || | + |   +    |    |+    +  ||+|
631 SERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQADL-LTVY 689

693 LVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP----TSHFVGMDGVQA 748
    ||||+|+|| +||  ||+ +|+|| |  +||   |+  |  +||      | | + |   
690 LVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLVDVSGTGT 744

749 FLQTYSHEVSLTADSRKSHLIFPQP 773
      |+| +|| ||  |      | +|
745 LFQSYQYEVCLTGGSETGEFKFLKP 769