Affine Alignment
 
Alignment between KCNS1 (top ENST00000537075.3 526aa) and KCNV1 (bottom ENST00000524391.6 500aa) score 15523

017 KVVLPTPLGGRS-----TETFVSEFPGPDTGIRWRRSDEALRVNVGGVRRQLSARALARF 071
    + +| +||   |     +  | ||  |    +      +   ||||| |  || +||+ |
006 RALLDSPLDSGSLTSLDSSVFCSEGEGEPLAL-----GDCFTVNVGGSRFVLSQQALSCF 060

072 PGTRLGRLQ----------AAASEEQARRLCDDYDEAAREFYFDRHPGFFLSLLHFYRTG 121
    | ||||+|           | |+      |||| +    |++|||    |  +||+||||
061 PHTRLGKLAVVVASYRRPGALAAVPSPLELCDDANPVDNEYFFDRSSQAFRYVLHYYRTG 120

122 HLHVLDELCVFAFGQEADYWGLGENALAACCRARYLERRLTQPHAWDEDSDTPSSVDPCP 181
     |||+++||  +| ||  |||+ | ++ +||| ||  |+        | |+|        
121 RLHVMEQLCALSFLQEIQYWGIDELSIDSCCRDRYFRRK--------ELSETLDFKKDTE 172

182 DEISDVQRELARYGAARCGRLRRRLWLTMENPGYSLPSKLFSCVSISVVLASIAAMCIHS 241
    |+ |  + |   +    |  +|++||  +| || |  +++|  +||  |+ ||  | + |
173 DQESQHESE-QDFSQGPCPTVRQKLWNILEKPGSSTAARIFGVISIIFVVVSIINMALMS 231

242 LPEYQAREAAAAVAAVAAGRSPEGVRDDPVLRRLEYFCIAWFSFEVSSRLLLAPSTRNFF 301
              | ++ +          |  +|  ||| ||+||+ |   | |       | 
232 ----------AELSWL----------DLQLLEILEYVCISWFTGEFVLRFLCVRDRCRFL 271

302 CHPLNLIDIVSVLPFYLTLLAGVALGDQGGKEFGHLGKVVQVFRLMRIFRVLKLARHSTG 361
        |+||++++||||+|||     | |  +|  ++|++||| ||+|  |+||| |||||
272 RKVPNIIDLLAILPFYITLLVESLSGSQTTQELENVGRIVQVLRLLRALRMLKLGRHSTG 331

362 LRSLGATLKHSYREVGILLLYLAVGVSVFSGVAYTAEKE-EDVGFNTIPACWWWGTVSMT 420
    ||||| |+   | |||+|||+|+||+|+|| | | ||+   |  | ++|  ||| | |||
332 LRSLGMTITQCYEEVGLLLLFLSVGISIFSTVEYFAEQSIPDTTFTSVPCAWWWATTSMT 391

421 TVGYGDVVPVTVAGKLAASGCILGGILVVALPITIIFNKFSHFYRRQKALEAAVR 475
    ||||||+ | |  ||+ |  ||| ||||+|||| || ++||  |   |  |||||
392 TVGYGDIRPDTTTGKIVAFMCILSGILVLALPIAIINDRFSACYFTLKLKEAAVR 446