UCSC Human Gene Sorter
 
genome assembly search
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Name
VisiGene
BLASTP
E-Value
Genome Position
Description
1ENSG00000237604n/a
    
    
     
n/achr21 44,175,971ENSG00000237604 (from geneSymbol)
2TRGV4n/a
    
    
     
n/achr7 38,354,116V region of the variable domain of T cell receptor (TR) gamma  chain that participates in the antigen recognition (PubMed:24600447).  Gamma-delta TRs recognize a variety of self and foreign non-peptide  antigens frequently expressed at the epithelial boundaries between the  host and external environment, including endogenous lipids presented by  MH-like protein CD1D and phosphoantigens presented by butyrophilin-like  molecule BTN3A1. Upon antigen recognition induces rapid, innate-like  immune responses involved in pathogen clearance and tissue repair  (PubMed:23348415, PubMed:28920588). Binding of gamma-delta TR complex  to antigen triggers phosphorylation of immunoreceptor tyrosine-based  activation motifs (ITAMs) in the CD3 chains by the LCK and FYN kinases,  allowing the recruitment, phosphorylation, and activation of ZAP70 that  facilitates phosphorylation of the scaffolding proteins LCP2 and LAT.  This lead to the formation of a supramolecular signalosome that  recruits the phospholipase PLCG1, resulting in calcium mobilization and  ERK activation, ultimately leading to T cell expansion and  differentiation into effector cells (PubMed:25674089). Gamma-delta TRs  are produced through somatic rearrangement of a limited repertoire of  variable (V), diversity (D), and joining (J) genes. The potential  diversity of gamma-delta TRs is conferred by the unique ability to  rearrange (D) genes in tandem and to utilize all three reading frames.  The combinatorial diversity is considerably increased by the sequence  exonuclease trimming and random nucleotide (N) region additions which  occur during the V-(D)-J rearrangements (PubMed:24387714). (from UniProt A0A0C4DH28)
3TSPAN3n/a
n/a
n/a
n/a
n/achr15 77,056,256tetraspanin 3, transcript variant 1 (from RefSeq NM_005724.6)
4LAIR1n/a
n/a
n/a
n/a
n/achr19 54,358,157leukocyte associated immunoglobulin like receptor 1, transcript variant h (from RefSeq NR_110279.3)
5CD160n/a
n/a
n/a
n/a
n/achr1 145,729,393CD160 molecule, transcript variant 1 (from RefSeq NM_007053.4)
6ZNF490n/a
n/a
n/a
n/a
n/achr19 12,593,456zinc finger protein 490 (from RefSeq NM_020714.3)
7LINC02978n/a
    
    
     
n/achr17 30,965,217LINC02978 (from geneSymbol)
8ATP6V0D1-DTn/a
n/a
n/a
n/a
n/achr16 67,493,645ATP6V0D1-DT (from geneSymbol)
9LINC00910n/a
n/a
n/a
n/a
n/achr17 43,363,526long intergenic non-protein coding RNA 910 (from HGNC LINC00910)
10RNU2-4Pn/a
n/a
n/a
n/a
n/achr17 43,387,321RNA, U2 small nuclear 4, pseudogene (from HGNC RNU2-4P)
11HAUS6P1n/a
    
    
     
n/achr7 53,188,163HAUS augmin like complex subunit 6 pseudogene 1 (from HGNC HAUS6P1)
12CYLD-AS1n/a
n/a
n/a
n/a
n/achr16 50,735,116CYLD antisense RNA 1, transcript variant 7 (from RefSeq NR_184279.1)
13TPM3P6n/a
    
    
     
n/achr19 53,479,720tropomyosin 3 pseudogene 6 (from HGNC TPM3P6)
14TMPPEn/a
n/a
n/a
n/a
n/achr3 33,093,784transmembrane protein with metallophosphoesterase domain, transcript variant 1 (from RefSeq NM_001039770.3)
15ENSG00000271554n/a
    
    
     
n/achr1 36,002,813ENSG00000271554 (from geneSymbol)
16ENSG00000267074n/a
    
    
     
n/achr17 35,504,980ENSG00000267074 (from geneSymbol)
17ZNF322P1n/a
n/a
n/a
n/a
n/achr9 97,198,907zinc finger protein 322 pseudogene 1 (from HGNC ZNF322P1)
18ENSG00000235308n/a
    
    
     
n/achr1 88,923,607ENSG00000235308 (from geneSymbol)
19SLX1A-SULT1A3n/a
n/a
n/a
n/a
n/achr16 30,199,369SLX1A-SULT1A3 readthrough (NMD candidate) (from RefSeq NR_037608.1)
20ENSG00000225531n/a
    
    
     
n/achr9 107,117,193ENSG00000225531 (from geneSymbol)
21ALG11n/a
n/a
n/a
n/a
n/achr13 52,022,999ALG11 alpha-1,2-mannosyltransferase, transcript variant A (from RefSeq NM_001004127.3)
22ENSG00000230092n/a
n/a
n/a
n/a
n/achr1 807,980ENSG00000230092 (from geneSymbol)
23FTH1P3n/a
    
    
     
n/achr2 27,393,075ferritin heavy chain 1 pseudogene 3 (from HGNC FTH1P3)
24IGBP1-AS1n/a
    
    
     
n/achrX 70,164,524IGBP1 antisense RNA 1 (from HGNC IGBP1-AS1)
25PTMAP9n/a
n/a
n/a
n/a
n/achr12 12,111,326PTMAP9 (from geneSymbol)
26PRR34n/a
n/a
n/a
n/a
n/achr22 46,051,811PRR34 long non-coding RNA (from RefSeq NR_165243.1)
27EGLN2n/a
n/a
n/a
n/a
n/achr19 40,803,812egl-9 family hypoxia inducible factor 2, transcript variant 3 (from RefSeq NM_080732.4)
28SLC25A53n/a
n/a
n/a
n/a
n/achrX 104,128,111solute carrier family 25 member 53 (from RefSeq NM_001012755.5)
29ZNF850n/a
n/a
n/a
n/a
n/achr19 36,758,143zinc finger protein 850, transcript variant 1 (from RefSeq NM_001193552.2)
30LRRC37A15Pn/a
    
    
     
n/achr4 102,728,997leucine rich repeat containing 37 member A15, pseudogene (from HGNC LRRC37A15P)
31RNU5B-2Pn/a
    
    
     
n/achr3 40,498,947RNA, U5B small nuclear 2, pseudogene (from HGNC RNU5B-2P)
32PTMAP4n/a
n/a
n/a
n/a
n/achr12 9,240,158prothymosin alpha pseudogene 4 (from HGNC PTMAP4)
33ENSG00000271664n/a
    
    
     
n/achr7 149,276,805ENSG00000271664 (from geneSymbol)
34RN7SL23Pn/a
n/a
n/a
n/a
n/achr11 61,444,286RNA, 7SL, cytoplasmic 23, pseudogene (from HGNC RN7SL23P)
35ENSG00000266373n/a
    
    
     
n/achr18 3,580,461ENSG00000266373 (from geneSymbol)
36ENSG00000255237n/a
    
    
     
n/achr11 463,414ENSG00000255237 (from geneSymbol)
37PSME2P2n/a
n/a
n/a
n/a
n/achr13 48,771,477proteasome activator subunit 2 pseudogene 2 (from HGNC PSME2P2)
38TAS1R3n/a
    
    
     
n/achr1 1,333,297taste 1 receptor member 3 (from RefSeq NM_152228.3)
39CICP5n/a
    
    
     
n/achr1 223,949,010capicua transcriptional repressor pseudogene 5 (from HGNC CICP5)
40TRPC6P10n/a
    
    
     
n/achr7 30,544,242TRPC6P10 (from geneSymbol)
41ENSG00000255421n/a
    
    
     
n/achr11 76,137,523ENSG00000255421 (from geneSymbol)
42SEC62-AS1n/a
    
    
     
n/achr3 169,982,125SEC62 antisense RNA 1 (from HGNC SEC62-AS1)
43UNC93B7n/a
    
    
     
n/achr4 9,495,901unc-93 homolog B7, pseudogene (from HGNC UNC93B7)
44HEATR5A-DTn/a
n/a
n/a
n/a
n/achr14 31,436,820HEATR5A divergent transcript (from RefSeq NR_110045.1)
45SNORD17n/a
    
    
     
n/achr20 17,962,828small nucleolar RNA, C/D box 17 (from RefSeq NR_003045.1)
46GLTC1n/a
    
    
     
n/achr11 68,027,635GLTC1 (from geneSymbol)
47ENSG00000259652n/a
n/a
n/a
n/a
n/achr15 77,044,420ENSG00000259652 (from geneSymbol)
48TIGITn/a
n/a
n/a
n/a
n/achr3 114,302,158T cell immunoreceptor with Ig and ITIM domains (from RefSeq NM_173799.4)
49LINC02656n/a
n/a
n/a
n/a
n/achr10 6,351,539long intergenic non-protein coding RNA 2656 (from RefSeq NR_148966.1)
50BEND3P1n/a
    
    
     
n/achr10 50,659,500BEN domain containing 3 pseudogene 1 (from HGNC BEND3P1)