UCSC Human Gene Sorter
 
genome assembly search
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#
Name
VisiGene
BLASTP
E-Value
Genome Position
Description
1ZDHHC20P1n/a
    
    
     
n/achr6 29,708,336zinc finger DHHC-type containing 20 pseudogene 1 (from HGNC ZDHHC20P1)
2ENSG00000262312n/a
n/a
n/a
n/a
n/achr16 3,544,126ENSG00000262312 (from geneSymbol)
3XCL1n/a
    
    
     
n/achr1 168,579,337X-C motif chemokine ligand 1 (from RefSeq NM_002995.3)
4PTPRN2-AS1n/a
n/a
n/a
n/a
n/achr7 157,856,190PTPRN2 antisense RNA 1 (from RefSeq NR_038966.1)
5LINC03015n/a
n/a
n/a
n/a
n/achr7 146,955LINC03015 (from geneSymbol)
6ECE1-AS1n/a
    
    
     
n/achr1 21,296,532ECE1 antisense RNA 1 (from RefSeq NR_038404.1)
7LINC03058n/a
    
    
     
n/achr14 20,784,090LINC03058 (from geneSymbol)
8ENSG00000271926n/a
    
    
     
n/achr5 72,953,954ENSG00000271926 (from geneSymbol)
9ENSG00000240710n/a
    
    
     
n/achr1 204,609,800ENSG00000240710 (from geneSymbol)
10PERPP3n/a
    
    
     
n/achr6 16,161,168PERPP3 (from geneSymbol)
11ZNF578n/a
n/a
n/a
n/a
n/achr19 52,485,217zinc finger protein 578, transcript variant 2 (from RefSeq NM_001366182.2)
12ENSG00000288253n/a
n/a
n/a
n/a
n/achr19 52,456,043ENSG00000288253 (from geneSymbol)
13ALG1L15Pn/a
    
    
     
n/achr3 156,044,551asparagine-linked glycosylation 1-like 15, pseudogene (from HGNC ALG1L15P)
14UNC93B5n/a
    
    
     
n/achr11 67,713,853unc-93 homolog B5, pseudogene (from HGNC UNC93B5)
15ENSG00000272334n/a
    
    
     
n/achr3 36,973,394ENSG00000272334 (from geneSymbol)
16TRGV2n/a
    
    
     
n/achr7 38,363,191V region of the variable domain of T cell receptor (TR) gamma  chain that participates in the antigen recognition (PubMed:24600447).  Gamma-delta TRs recognize a variety of self and foreign non-peptide  antigens frequently expressed at the epithelial boundaries between the  host and external environment, including endogenous lipids presented by  MH-like protein CD1D and phosphoantigens presented by butyrophilin-like  molecule BTN3A1. Upon antigen recognition induces rapid, innate-like  immune responses involved in pathogen clearance and tissue repair  (PubMed:23348415, PubMed:28920588). Binding of gamma-delta TR complex  to antigen triggers phosphorylation of immunoreceptor tyrosine-based  activation motifs (ITAMs) in the CD3 chains by the LCK and FYN kinases,  allowing the recruitment, phosphorylation, and activation of ZAP70 that  facilitates phosphorylation of the scaffolding proteins LCP2 and LAT.  This lead to the formation of a supramolecular signalosome that  recruits the phospholipase PLCG1, resulting in calcium mobilization and  ERK activation, ultimately leading to T cell expansion and  differentiation into effector cells (PubMed:25674089). Gamma-delta TRs  are produced through somatic rearrangement of a limited repertoire of  variable (V), diversity (D), and joining (J) genes. The potential  diversity of gamma-delta TRs is conferred by the unique ability to  rearrange (D) genes in tandem and to utilize all three reading frames.  The combinatorial diversity is considerably increased by the sequence  exonuclease trimming and random nucleotide (N) region additions which  occur during the V-(D)-J rearrangements (PubMed:24387714). (from UniProt A0A075B6R0)
17UBASH3An/a
n/a
n/a
n/a
n/achr21 42,425,793ubiquitin associated and SH3 domain containing A, transcript variant 1 (from RefSeq NM_018961.4)
18LGALS8-AS1n/a
n/a
n/a
n/a
n/achr1 236,523,780LGALS8 antisense RNA 1 (from HGNC LGALS8-AS1)
19ENSG00000255585n/a
n/a
n/a
n/a
n/achr9 137,788,177ENSG00000255585 (from geneSymbol)
20ENSG00000293104n/a
n/a
n/a
n/a
n/achr9 137,782,887ENSG00000293104 (from geneSymbol)
21NOX5n/a
n/a
n/a
n/a
n/achr15 69,038,728NADPH oxidase 5, transcript variant 1 (from RefSeq NM_024505.4)
22SPESP1-NOX5n/a
n/a
n/a
n/a
n/achr15 68,993,629SPESP1-NOX5 (from geneSymbol)
23ENSG00000272109n/a
    
    
     
n/achr5 96,804,875ENSG00000272109 (from geneSymbol)
24OGFRP1n/a
    
    
     
n/achr22 42,274,639opioid growth factor receptor pseudogene 1 (from HGNC OGFRP1)
25ENSG00000259397n/a
n/a
n/a
n/a
n/achr15 35,092,845ENSG00000259397 (from geneSymbol)
26ENSG00000236299n/a
n/a
n/a
n/a
n/achr7 63,894,001ENSG00000236299 (from geneSymbol)
27HTR5BPn/a
    
    
     
n/achr2 117,881,3825-hydroxytryptamine receptor 5B, pseudogene (from HGNC HTR5BP)
28NSMCE1-DTn/a
n/a
n/a
n/a
n/achr16 27,279,336NSMCE1 divergent transcript (from RefSeq NR_037184.1)
29MIR646HGn/a
n/a
n/a
n/a
n/achr20 60,396,125MIR646 host gene (from HGNC MIR646HG)
30ENSG00000217078n/a
    
    
     
n/achr6 16,163,569ENSG00000217078 (from geneSymbol)
31ENSG00000262777n/a
    
    
     
n/achr17 1,425,418ENSG00000262777 (from geneSymbol)
32TRAT1n/a
n/a
n/a
n/a
n/achr3 108,838,895T cell receptor associated transmembrane adaptor 1, transcript variant 1 (from RefSeq NM_016388.4)
33HLA-Wn/a
    
    
     
n/achr6 29,957,583major histocompatibility complex, class I, W (pseudogene) (from HGNC HLA-W)
34GTF2IP14n/a
    
    
     
n/achr7 65,092,167general transcription factor IIi pseudogene 14 (from HGNC GTF2IP14)
35ENSG00000267117n/a
    
    
     
n/achr19 55,694,338ENSG00000267117 (from geneSymbol)
36CNN2P9n/a
    
    
     
n/achr6 110,858,693calponin 2 pseudogene 9 (from HGNC CNN2P9)
37ENSG00000260022n/a
    
    
     
n/achr16 884,435ENSG00000260022 (from geneSymbol)
38RPL17P28n/a
    
    
     
n/achr7 139,049,731ribosomal protein L17 pseudogene 28 (from HGNC RPL17P28)
39TOB2P1n/a
n/a
n/a
n/a
n/achr6 28,218,138transducer of ERBB2, 2 pseudogene 1 (from HGNC TOB2P1)
40TBCAP3n/a
    
    
     
n/achr4 98,909,692tubulin folding cofactor A pseudogene 3 (from HGNC TBCAP3)
41RPS12P20n/a
    
    
     
n/achr11 72,708,375ribosomal protein S12 pseudogene 20 (from HGNC RPS12P20)
42ZNF223n/a
n/a
n/a
n/a
n/achr19 44,060,017zinc finger protein 223 (from RefSeq NM_013361.6)
43SETD4-AS1n/a
    
    
     
n/achr21 36,062,420SETD4 antisense RNA 1 (from RefSeq NR_186380.1)
44CTLA4n/a
n/a
n/a
n/a
n/achr2 203,870,868cytotoxic T-lymphocyte associated protein 4, transcript variant 1 (from RefSeq NM_005214.5)
45NDUFB8P2n/a
    
    
     
n/achr17 59,885,283NADH:ubiquinone oxidoreductase subunit B8 pseudogene 2 (from HGNC NDUFB8P2)
46ENSG00000225057n/a
    
    
     
n/achr2 238,243,658ENSG00000225057 (from geneSymbol)
47ENSG00000258983n/a
n/a
n/a
n/a
n/achr14 88,507,418ENSG00000258983 (from geneSymbol)
48ENSG00000215304n/a
n/a
n/a
n/a
n/achr15 32,417,094ENSG00000215304 (from geneSymbol)
49SCOCP1n/a
    
    
     
n/achr14 60,159,150short coiled-coil protein pseudogene 1 (from HGNC SCOCP1)
50ENSG00000259531n/a
    
    
     
n/achr15 49,365,904ENSG00000259531 (from geneSymbol)