Assay Summary H2BK15ac Summary Track Settings
 
Roadmap Epigenome H2BK15ac Summary

Track collection: Assay Summary

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+  All tracks in this collection (37)

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     ENCFF015GRW_IMR-90  ENCFF015GRW IMR-90 by ChIP-seq    Data format 
     ENCFF021OFY_mesendoderm  ENCFF021OFY mesendoderm by ChIP-seq    Data format 
     ENCFF043BXM_IMR-90  ENCFF043BXM IMR-90 by ChIP-seq    Data format 
     ENCFF045GOB_IMR-90  ENCFF045GOB IMR-90 by ChIP-seq    Data format 
     ENCFF079PZG_mesendoderm  ENCFF079PZG mesendoderm by ChIP-seq    Data format 
     ENCFF093QXR_neuronal_stem_cell  ENCFF093QXR neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF099VUH_neuronal_stem_cell  ENCFF099VUH neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF127WWU_mesendoderm  ENCFF127WWU mesendoderm by ChIP-seq    Data format 
     ENCFF144ZRV_neuronal_stem_cell  ENCFF144ZRV neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF149ZYU_H9  ENCFF149ZYU H9 by ChIP-seq    Data format 
     ENCFF150NUD_mesenchymal_stem_cell  ENCFF150NUD mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF152OXY_H1  ENCFF152OXY H1 by ChIP-seq    Data format 
     ENCFF162RVT_IMR-90  ENCFF162RVT IMR-90 by ChIP-seq    Data format 
     ENCFF185LKD_H9  ENCFF185LKD H9 by ChIP-seq    Data format 
     ENCFF217TZR_mesenchymal_stem_cell  ENCFF217TZR mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF226VXI_H9  ENCFF226VXI H9 by ChIP-seq    Data format 
     ENCFF231XXF_neuronal_stem_cell  ENCFF231XXF neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF236YZE_H1  ENCFF236YZE H1 by ChIP-seq    Data format 
     ENCFF241ORN_H1  ENCFF241ORN H1 by ChIP-seq    Data format 
     ENCFF247GZQ_mesendoderm  ENCFF247GZQ mesendoderm by ChIP-seq    Data format 
     ENCFF248YHS_neuronal_stem_cell  ENCFF248YHS neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF262IHL_H9  ENCFF262IHL H9 by ChIP-seq    Data format 
     ENCFF271AOD_mesenchymal_stem_cell  ENCFF271AOD mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF276YTK_H1  ENCFF276YTK H1 by ChIP-seq    Data format 
     ENCFF281HHI_H9  ENCFF281HHI H9 by ChIP-seq    Data format 
     ENCFF296HQD_IMR-90  ENCFF296HQD IMR-90 by ChIP-seq    Data format 
     ENCFF301YOA_neuronal_stem_cell  ENCFF301YOA neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF309VRV_mesendoderm  ENCFF309VRV mesendoderm by ChIP-seq    Data format 
     ENCFF324TFE_IMR-90  ENCFF324TFE IMR-90 by ChIP-seq    Data format 
     ENCFF344DLU_H1  ENCFF344DLU H1 by ChIP-seq    Data format 
     ENCFF346YYZ_H1  ENCFF346YYZ H1 by ChIP-seq    Data format 
     ENCFF364SAW_H1  ENCFF364SAW H1 by ChIP-seq    Data format 
     ENCFF397PZK_mesendoderm  ENCFF397PZK mesendoderm by ChIP-seq    Data format 
     ENCFF410AXA_H9  ENCFF410AXA H9 by ChIP-seq    Data format 
     ENCFF422GWI_neuronal_stem_cell  ENCFF422GWI neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF433ZHQ_IMR-90  ENCFF433ZHQ IMR-90 by ChIP-seq    Data format 
     ENCFF442JEY_mesendoderm  ENCFF442JEY mesendoderm by ChIP-seq    Data format 
     ENCFF457TOH_H9  ENCFF457TOH H9 by ChIP-seq    Data format 
     ENCFF466ALG_mesendoderm  ENCFF466ALG mesendoderm by ChIP-seq    Data format 
     ENCFF493USL_H1  ENCFF493USL H1 by ChIP-seq    Data format 
     ENCFF496QGH_neuronal_stem_cell  ENCFF496QGH neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF529TKB_H1  ENCFF529TKB H1 by ChIP-seq    Data format 
     ENCFF559JXA_neuronal_stem_cell  ENCFF559JXA neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF567VTK_H1  ENCFF567VTK H1 by ChIP-seq    Data format 
     ENCFF568KIV_H9  ENCFF568KIV H9 by ChIP-seq    Data format 
     ENCFF581SBM_mesendoderm  ENCFF581SBM mesendoderm by ChIP-seq    Data format 
     ENCFF605POE_IMR-90  ENCFF605POE IMR-90 by ChIP-seq    Data format 
     ENCFF610TMA_mesendoderm  ENCFF610TMA mesendoderm by ChIP-seq    Data format 
     ENCFF627WLF_neuronal_stem_cell  ENCFF627WLF neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF641PKG_IMR-90  ENCFF641PKG IMR-90 by ChIP-seq    Data format 
     ENCFF665QEX_mesendoderm  ENCFF665QEX mesendoderm by ChIP-seq    Data format 
     ENCFF668AMF_mesenchymal_stem_cell  ENCFF668AMF mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF677UXD_IMR-90  ENCFF677UXD IMR-90 by ChIP-seq    Data format 
     ENCFF691TXU_H9  ENCFF691TXU H9 by ChIP-seq    Data format 
     ENCFF696IEF_neuronal_stem_cell  ENCFF696IEF neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF781NUI_H9  ENCFF781NUI H9 by ChIP-seq    Data format 
     ENCFF822QGJ_IMR-90  ENCFF822QGJ IMR-90 by ChIP-seq    Data format 
     ENCFF828SKT_IMR-90  ENCFF828SKT IMR-90 by ChIP-seq    Data format 
     ENCFF851SLX_mesendoderm  ENCFF851SLX mesendoderm by ChIP-seq    Data format 
     ENCFF865YRN_H9  ENCFF865YRN H9 by ChIP-seq    Data format 
     ENCFF867WGS_H9  ENCFF867WGS H9 by ChIP-seq    Data format 
     ENCFF908DKV_H1  ENCFF908DKV H1 by ChIP-seq    Data format 
     ENCFF910ERS_IMR-90  ENCFF910ERS IMR-90 by ChIP-seq    Data format 
     ENCFF984IYK_H1  ENCFF984IYK H1 by ChIP-seq    Data format 
     ENCFF993KIC_IMR-90  ENCFF993KIC IMR-90 by ChIP-seq    Data format 
    
Metadata:
Assay:ChIP-seq
OutputType:fold_change_over_control
Sample:trophoblast_cell
genome:hg38
Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the assay type. Data were generated using various assay methods across many different sample types for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF