Assay Summary H3K18ac Summary Track Settings
 
Roadmap Epigenome H3K18ac Summary

Track collection: Assay Summary

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+  All tracks in this collection (37)

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     ENCFF002XQY_H1  ENCFF002XQY H1 by ChIP-seq    Data format 
     ENCFF009VCO_trophoblast_cell  ENCFF009VCO trophoblast_cell by ChIP-seq    Data format 
     ENCFF022XIN_neuronal_stem_cell  ENCFF022XIN neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF027TZM_H9  ENCFF027TZM H9 by ChIP-seq    Data format 
     ENCFF035SPI_IMR-90  ENCFF035SPI IMR-90 by ChIP-seq    Data format 
     ENCFF042LLF_IMR-90  ENCFF042LLF IMR-90 by ChIP-seq    Data format 
     ENCFF079NJL_neuronal_stem_cell  ENCFF079NJL neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF082TNY_H1  ENCFF082TNY H1 by ChIP-seq    Data format 
     ENCFF099ING_neuronal_stem_cell  ENCFF099ING neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF104ABW_H9  ENCFF104ABW H9 by ChIP-seq    Data format 
     ENCFF106AXQ_neuronal_stem_cell  ENCFF106AXQ neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF109PBD_mesenchymal_stem_cell  ENCFF109PBD mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF112IXD_mesenchymal_stem_cell  ENCFF112IXD mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF119EVR_trophoblast_cell  ENCFF119EVR trophoblast_cell by ChIP-seq    Data format 
     ENCFF134YSG_H9  ENCFF134YSG H9 by ChIP-seq    Data format 
     ENCFF160QGF_mesendoderm  ENCFF160QGF mesendoderm by ChIP-seq    Data format 
     ENCFF186SDT_trophoblast_cell  ENCFF186SDT trophoblast_cell by ChIP-seq    Data format 
     ENCFF194JFQ_mesendoderm  ENCFF194JFQ mesendoderm by ChIP-seq    Data format 
     ENCFF205JMZ_trophoblast_cell  ENCFF205JMZ trophoblast_cell by ChIP-seq    Data format 
     ENCFF208KED_trophoblast_cell  ENCFF208KED trophoblast_cell by ChIP-seq    Data format 
     ENCFF214SUW_IMR-90  ENCFF214SUW IMR-90 by ChIP-seq    Data format 
     ENCFF219ZKQ_mesendoderm  ENCFF219ZKQ mesendoderm by ChIP-seq    Data format 
     ENCFF224NBE_mesendoderm  ENCFF224NBE mesendoderm by ChIP-seq    Data format 
     ENCFF230PON_mesenchymal_stem_cell  ENCFF230PON mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF264ZDB_trophoblast_cell  ENCFF264ZDB trophoblast_cell by ChIP-seq    Data format 
     ENCFF272MVG_neuronal_stem_cell  ENCFF272MVG neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF275LLO_trophoblast_cell  ENCFF275LLO trophoblast_cell by ChIP-seq    Data format 
     ENCFF302QQF_neuronal_stem_cell  ENCFF302QQF neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF303GHQ_H1  ENCFF303GHQ H1 by ChIP-seq    Data format 
     ENCFF308OFN_H9  ENCFF308OFN H9 by ChIP-seq    Data format 
     ENCFF316TCW_mesendoderm  ENCFF316TCW mesendoderm by ChIP-seq    Data format 
     ENCFF336BKJ_H9  ENCFF336BKJ H9 by ChIP-seq    Data format 
     ENCFF339DXG_H1  ENCFF339DXG H1 by ChIP-seq    Data format 
     ENCFF379UCI_IMR-90  ENCFF379UCI IMR-90 by ChIP-seq    Data format 
     ENCFF391XQM_neuronal_stem_cell  ENCFF391XQM neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF393VRU_IMR-90  ENCFF393VRU IMR-90 by ChIP-seq    Data format 
     ENCFF401AIG_H9  ENCFF401AIG H9 by ChIP-seq    Data format 
     ENCFF413LVW_H1  ENCFF413LVW H1 by ChIP-seq    Data format 
     ENCFF428JLC_IMR-90  ENCFF428JLC IMR-90 by ChIP-seq    Data format 
     ENCFF446DUL_mesenchymal_stem_cell  ENCFF446DUL mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF454IAZ_neuronal_stem_cell  ENCFF454IAZ neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF463PAH_mesenchymal_stem_cell  ENCFF463PAH mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF475AZJ_H1  ENCFF475AZJ H1 by ChIP-seq    Data format 
     ENCFF483OVT_trophoblast_cell  ENCFF483OVT trophoblast_cell by ChIP-seq    Data format 
     ENCFF485UCK_neuronal_stem_cell  ENCFF485UCK neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF505KOY_H9  ENCFF505KOY H9 by ChIP-seq    Data format 
     ENCFF512ZYT_neuronal_stem_cell  ENCFF512ZYT neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF529PKJ_H9  ENCFF529PKJ H9 by ChIP-seq    Data format 
     ENCFF534PYE_neuronal_stem_cell  ENCFF534PYE neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF539QRC_H9  ENCFF539QRC H9 by ChIP-seq    Data format 
     ENCFF540FHE_mesendoderm  ENCFF540FHE mesendoderm by ChIP-seq    Data format 
     ENCFF545RKP_mesendoderm  ENCFF545RKP mesendoderm by ChIP-seq    Data format 
     ENCFF553BNU_H1  ENCFF553BNU H1 by ChIP-seq    Data format 
     ENCFF565RPD_trophoblast_cell  ENCFF565RPD trophoblast_cell by ChIP-seq    Data format 
     ENCFF572ALP_IMR-90  ENCFF572ALP IMR-90 by ChIP-seq    Data format 
     ENCFF576RSF_mesenchymal_stem_cell  ENCFF576RSF mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF577VAD_IMR-90  ENCFF577VAD IMR-90 by ChIP-seq    Data format 
     ENCFF588KME_mesenchymal_stem_cell  ENCFF588KME mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF592COP_H1  ENCFF592COP H1 by ChIP-seq    Data format 
     ENCFF610ZRX_neuronal_stem_cell  ENCFF610ZRX neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF642FDT_H1  ENCFF642FDT H1 by ChIP-seq    Data format 
     ENCFF649UOB_H1  ENCFF649UOB H1 by ChIP-seq    Data format 
     ENCFF655ZRF_mesendoderm  ENCFF655ZRF mesendoderm by ChIP-seq    Data format 
     ENCFF666PZW_IMR-90  ENCFF666PZW IMR-90 by ChIP-seq    Data format 
     ENCFF683KJQ_mesenchymal_stem_cell  ENCFF683KJQ mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF686YFB_H1  ENCFF686YFB H1 by ChIP-seq    Data format 
     ENCFF712KGJ_mesendoderm  ENCFF712KGJ mesendoderm by ChIP-seq    Data format 
     ENCFF733LYD_H9  ENCFF733LYD H9 by ChIP-seq    Data format 
     ENCFF783SYJ_H9  ENCFF783SYJ H9 by ChIP-seq    Data format 
     ENCFF792HPA_mesendoderm  ENCFF792HPA mesendoderm by ChIP-seq    Data format 
     ENCFF805FPB_IMR-90  ENCFF805FPB IMR-90 by ChIP-seq    Data format 
     ENCFF812KJD_trophoblast_cell  ENCFF812KJD trophoblast_cell by ChIP-seq    Data format 
     ENCFF818ANI_mesendoderm  ENCFF818ANI mesendoderm by ChIP-seq    Data format 
     ENCFF822XYF_trophoblast_cell  ENCFF822XYF trophoblast_cell by ChIP-seq    Data format 
     ENCFF846SNQ_IMR-90  ENCFF846SNQ IMR-90 by ChIP-seq    Data format 
     ENCFF850LAK_H9  ENCFF850LAK H9 by ChIP-seq    Data format 
     ENCFF902GES_IMR-90  ENCFF902GES IMR-90 by ChIP-seq    Data format 
     ENCFF948JMU_mesendoderm  ENCFF948JMU mesendoderm by ChIP-seq    Data format 
     ENCFF975JVF_H1  ENCFF975JVF H1 by ChIP-seq    Data format 
    
Metadata:
Assay:ChIP-seq
OutputType:signal_p-value
Sample:urinary_bladder
genome:hg38
Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the assay type. Data were generated using various assay methods across many different sample types for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF