Assay Summary H3K79me2 Summary Track Settings
 
Roadmap Epigenome H3K79me2 Summary

Track collection: Assay Summary

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+  All tracks in this collection (37)

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     ENCFF012YIP_mesendoderm  ENCFF012YIP mesendoderm by ChIP-seq    Data format 
     ENCFF050ZTH_IMR-90  ENCFF050ZTH IMR-90 by ChIP-seq    Data format 
     ENCFF060XAU_mesendoderm  ENCFF060XAU mesendoderm by ChIP-seq    Data format 
     ENCFF065UAL_H9  ENCFF065UAL H9 by ChIP-seq    Data format 
     ENCFF085BMC_trophoblast_cell  ENCFF085BMC trophoblast_cell by ChIP-seq    Data format 
     ENCFF090CRO_mesendoderm  ENCFF090CRO mesendoderm by ChIP-seq    Data format 
     ENCFF091EHC_IMR-90  ENCFF091EHC IMR-90 by ChIP-seq    Data format 
     ENCFF099HMW_trophoblast_cell  ENCFF099HMW trophoblast_cell by ChIP-seq    Data format 
     ENCFF125VSJ_mesendoderm  ENCFF125VSJ mesendoderm by ChIP-seq    Data format 
     ENCFF204VAW_IMR-90  ENCFF204VAW IMR-90 by ChIP-seq    Data format 
     ENCFF230VYG_mesendoderm  ENCFF230VYG mesendoderm by ChIP-seq    Data format 
     ENCFF232EKJ_trophoblast_cell  ENCFF232EKJ trophoblast_cell by ChIP-seq    Data format 
     ENCFF234WMO_H1  ENCFF234WMO H1 by ChIP-seq    Data format 
     ENCFF250YIN_mesendoderm  ENCFF250YIN mesendoderm by ChIP-seq    Data format 
     ENCFF252ZFN_H1  ENCFF252ZFN H1 by ChIP-seq    Data format 
     ENCFF255LMC_H9  ENCFF255LMC H9 by ChIP-seq    Data format 
     ENCFF303CCM_trophoblast_cell  ENCFF303CCM trophoblast_cell by ChIP-seq    Data format 
     ENCFF313ORF_mesendoderm  ENCFF313ORF mesendoderm by ChIP-seq    Data format 
     ENCFF325ABU_IMR-90  ENCFF325ABU IMR-90 by ChIP-seq    Data format 
     ENCFF333YCB_mesendoderm  ENCFF333YCB mesendoderm by ChIP-seq    Data format 
     ENCFF387VHH_H9  ENCFF387VHH H9 by ChIP-seq    Data format 
     ENCFF393HUO_H9  ENCFF393HUO H9 by ChIP-seq    Data format 
     ENCFF401PZS_H1  ENCFF401PZS H1 by ChIP-seq    Data format 
     ENCFF402IGM_IMR-90  ENCFF402IGM IMR-90 by ChIP-seq    Data format 
     ENCFF426EBN_H1  ENCFF426EBN H1 by ChIP-seq    Data format 
     ENCFF431EQQ_mesendoderm  ENCFF431EQQ mesendoderm by ChIP-seq    Data format 
     ENCFF472HEN_H1  ENCFF472HEN H1 by ChIP-seq    Data format 
     ENCFF476JCQ_H1  ENCFF476JCQ H1 by ChIP-seq    Data format 
     ENCFF477VVO_H9  ENCFF477VVO H9 by ChIP-seq    Data format 
     ENCFF478OJT_H9  ENCFF478OJT H9 by ChIP-seq    Data format 
     ENCFF515OPP_mesendoderm  ENCFF515OPP mesendoderm by ChIP-seq    Data format 
     ENCFF519IHI_H1  ENCFF519IHI H1 by ChIP-seq    Data format 
     ENCFF558EMX_trophoblast_cell  ENCFF558EMX trophoblast_cell by ChIP-seq    Data format 
     ENCFF608WZS_IMR-90  ENCFF608WZS IMR-90 by ChIP-seq    Data format 
     ENCFF611IRQ_trophoblast_cell  ENCFF611IRQ trophoblast_cell by ChIP-seq    Data format 
     ENCFF623CHU_IMR-90  ENCFF623CHU IMR-90 by ChIP-seq    Data format 
     ENCFF661RSD_trophoblast_cell  ENCFF661RSD trophoblast_cell by ChIP-seq    Data format 
     ENCFF678AZD_H1  ENCFF678AZD H1 by ChIP-seq    Data format 
     ENCFF750FRN_trophoblast_cell  ENCFF750FRN trophoblast_cell by ChIP-seq    Data format 
     ENCFF763YOO_IMR-90  ENCFF763YOO IMR-90 by ChIP-seq    Data format 
     ENCFF797RZK_mesendoderm  ENCFF797RZK mesendoderm by ChIP-seq    Data format 
     ENCFF798HCY_H1  ENCFF798HCY H1 by ChIP-seq    Data format 
     ENCFF818ZMU_trophoblast_cell  ENCFF818ZMU trophoblast_cell by ChIP-seq    Data format 
     ENCFF831DZY_trophoblast_cell  ENCFF831DZY trophoblast_cell by ChIP-seq    Data format 
     ENCFF833AVU_H1  ENCFF833AVU H1 by ChIP-seq    Data format 
     ENCFF859UDN_mesendoderm  ENCFF859UDN mesendoderm by ChIP-seq    Data format 
     ENCFF863WNB_H1  ENCFF863WNB H1 by ChIP-seq    Data format 
     ENCFF868TLW_H1  ENCFF868TLW H1 by ChIP-seq    Data format 
     ENCFF885STR_H9  ENCFF885STR H9 by ChIP-seq    Data format 
     ENCFF889EYF_H9  ENCFF889EYF H9 by ChIP-seq    Data format 
     ENCFF910NFG_trophoblast_cell  ENCFF910NFG trophoblast_cell by ChIP-seq    Data format 
     ENCFF932FAE_IMR-90  ENCFF932FAE IMR-90 by ChIP-seq    Data format 
     ENCFF932RKW_H9  ENCFF932RKW H9 by ChIP-seq    Data format 
     ENCFF961CWW_IMR-90  ENCFF961CWW IMR-90 by ChIP-seq    Data format 
     ENCFF966HNG_H9  ENCFF966HNG H9 by ChIP-seq    Data format 
     ENCFF974LDP_H9  ENCFF974LDP H9 by ChIP-seq    Data format 
     ENCFF975ITO_IMR-90  ENCFF975ITO IMR-90 by ChIP-seq    Data format 
     ENCFF990BXZ_IMR-90  ENCFF990BXZ IMR-90 by ChIP-seq    Data format 
     ENCFF993RJV_H9  ENCFF993RJV H9 by ChIP-seq    Data format 
    
Metadata:
Assay:ChIP-seq
OutputType:signal_p-value
Sample:trophoblast_cell
genome:hg38
Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the assay type. Data were generated using various assay methods across many different sample types for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF