Assay Summary H4K20me1 Summary Track Settings
 
Roadmap Epigenome H4K20me1 Summary

Track collection: Assay Summary

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+  All tracks in this collection (37)

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     ENCFF018LYW_IMR-90  ENCFF018LYW IMR-90 by ChIP-seq    Data format 
     ENCFF064VCF_IMR-90  ENCFF064VCF IMR-90 by ChIP-seq    Data format 
     ENCFF109PLZ_IMR-90  ENCFF109PLZ IMR-90 by ChIP-seq    Data format 
     ENCFF156JZY_H1  ENCFF156JZY H1 by ChIP-seq    Data format 
     ENCFF163BOS_IMR-90  ENCFF163BOS IMR-90 by ChIP-seq    Data format 
     ENCFF168HFL_H1  ENCFF168HFL H1 by ChIP-seq    Data format 
     ENCFF281EZC_IMR-90  ENCFF281EZC IMR-90 by ChIP-seq    Data format 
     ENCFF288DEB_IMR-90  ENCFF288DEB IMR-90 by ChIP-seq    Data format 
     ENCFF290WOP_H1  ENCFF290WOP H1 by ChIP-seq    Data format 
     ENCFF295EWC_IMR-90  ENCFF295EWC IMR-90 by ChIP-seq    Data format 
     ENCFF333TAK_H1  ENCFF333TAK H1 by ChIP-seq    Data format 
     ENCFF354AQX_IMR-90  ENCFF354AQX IMR-90 by ChIP-seq    Data format 
     ENCFF398QPY_IMR-90  ENCFF398QPY IMR-90 by ChIP-seq    Data format 
     ENCFF441XDX_H1  ENCFF441XDX H1 by ChIP-seq    Data format 
     ENCFF466TGZ_IMR-90  ENCFF466TGZ IMR-90 by ChIP-seq    Data format 
     ENCFF506MUV_H9  ENCFF506MUV H9 by ChIP-seq    Data format 
     ENCFF511ZNC_H1  ENCFF511ZNC H1 by ChIP-seq    Data format 
     ENCFF548ENQ_H9  ENCFF548ENQ H9 by ChIP-seq    Data format 
     ENCFF583PGL_H9  ENCFF583PGL H9 by ChIP-seq    Data format 
     ENCFF585RWQ_IMR-90  ENCFF585RWQ IMR-90 by ChIP-seq    Data format 
     ENCFF772CZB_H1  ENCFF772CZB H1 by ChIP-seq    Data format 
     ENCFF832YWP_H1  ENCFF832YWP H1 by ChIP-seq    Data format 
     ENCFF850KLR_H9  ENCFF850KLR H9 by ChIP-seq    Data format 
     ENCFF914OQH_H1  ENCFF914OQH H1 by ChIP-seq    Data format 
     ENCFF950BPC_H1  ENCFF950BPC H1 by ChIP-seq    Data format 
     ENCFF952WQK_H1  ENCFF952WQK H1 by ChIP-seq    Data format 
     ENCFF963KYW_H1  ENCFF963KYW H1 by ChIP-seq    Data format 
    
Metadata:
Assay:ChIP-seq
OutputType:signal_p-value
Sample:neuronal_stem_cell
genome:hg38
Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the assay type. Data were generated using various assay methods across many different sample types for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF