Assay Summary H4K91ac Summary Track Settings
 
Roadmap Epigenome H4K91ac Summary

Track collection: Assay Summary

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+  All tracks in this collection (37)

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     ENCFF015EBN_H1  ENCFF015EBN H1 by ChIP-seq    Data format 
     ENCFF022GOB_H9  ENCFF022GOB H9 by ChIP-seq    Data format 
     ENCFF052NXU_H1  ENCFF052NXU H1 by ChIP-seq    Data format 
     ENCFF060TPE_mesenchymal_stem_cell  ENCFF060TPE mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF063HYF_H1  ENCFF063HYF H1 by ChIP-seq    Data format 
     ENCFF068LXN_H1  ENCFF068LXN H1 by ChIP-seq    Data format 
     ENCFF068SCH_H9  ENCFF068SCH H9 by ChIP-seq    Data format 
     ENCFF071DVW_H9  ENCFF071DVW H9 by ChIP-seq    Data format 
     ENCFF083PAZ_H9  ENCFF083PAZ H9 by ChIP-seq    Data format 
     ENCFF094PVC_H1  ENCFF094PVC H1 by ChIP-seq    Data format 
     ENCFF109GND_IMR-90  ENCFF109GND IMR-90 by ChIP-seq    Data format 
     ENCFF131DYG_H1  ENCFF131DYG H1 by ChIP-seq    Data format 
     ENCFF146REA_trophoblast_cell  ENCFF146REA trophoblast_cell by ChIP-seq    Data format 
     ENCFF230RUZ_H9  ENCFF230RUZ H9 by ChIP-seq    Data format 
     ENCFF253WIZ_IMR-90  ENCFF253WIZ IMR-90 by ChIP-seq    Data format 
     ENCFF275JIE_IMR-90  ENCFF275JIE IMR-90 by ChIP-seq    Data format 
     ENCFF277PLB_neuronal_stem_cell  ENCFF277PLB neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF279QDX_H1  ENCFF279QDX H1 by ChIP-seq    Data format 
     ENCFF284OGI_mesenchymal_stem_cell  ENCFF284OGI mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF306QKF_IMR-90  ENCFF306QKF IMR-90 by ChIP-seq    Data format 
     ENCFF335IHO_IMR-90  ENCFF335IHO IMR-90 by ChIP-seq    Data format 
     ENCFF341KTZ_neuronal_stem_cell  ENCFF341KTZ neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF352DAQ_IMR-90  ENCFF352DAQ IMR-90 by ChIP-seq    Data format 
     ENCFF367ZNK_H9  ENCFF367ZNK H9 by ChIP-seq    Data format 
     ENCFF387PHO_IMR-90  ENCFF387PHO IMR-90 by ChIP-seq    Data format 
     ENCFF446JHW_H9  ENCFF446JHW H9 by ChIP-seq    Data format 
     ENCFF497QPQ_H1  ENCFF497QPQ H1 by ChIP-seq    Data format 
     ENCFF534QKV_H9  ENCFF534QKV H9 by ChIP-seq    Data format 
     ENCFF538ZDB_mesenchymal_stem_cell  ENCFF538ZDB mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF547OOG_neuronal_stem_cell  ENCFF547OOG neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF567YCC_H9  ENCFF567YCC H9 by ChIP-seq    Data format 
     ENCFF606NGK_H9  ENCFF606NGK H9 by ChIP-seq    Data format 
     ENCFF610PWI_H1  ENCFF610PWI H1 by ChIP-seq    Data format 
     ENCFF649HHW_H1  ENCFF649HHW H1 by ChIP-seq    Data format 
     ENCFF651WCX_mesenchymal_stem_cell  ENCFF651WCX mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF688ZPD_trophoblast_cell  ENCFF688ZPD trophoblast_cell by ChIP-seq    Data format 
     ENCFF710LDA_neuronal_stem_cell  ENCFF710LDA neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF719DWX_H1  ENCFF719DWX H1 by ChIP-seq    Data format 
     ENCFF728TZJ_H9  ENCFF728TZJ H9 by ChIP-seq    Data format 
     ENCFF740YDG_H9  ENCFF740YDG H9 by ChIP-seq    Data format 
     ENCFF744DSY_IMR-90  ENCFF744DSY IMR-90 by ChIP-seq    Data format 
     ENCFF751NMA_trophoblast_cell  ENCFF751NMA trophoblast_cell by ChIP-seq    Data format 
     ENCFF755INA_IMR-90  ENCFF755INA IMR-90 by ChIP-seq    Data format 
     ENCFF769CGL_IMR-90  ENCFF769CGL IMR-90 by ChIP-seq    Data format 
     ENCFF799VTM_IMR-90  ENCFF799VTM IMR-90 by ChIP-seq    Data format 
     ENCFF851RHK_H1  ENCFF851RHK H1 by ChIP-seq    Data format 
     ENCFF899EAZ_IMR-90  ENCFF899EAZ IMR-90 by ChIP-seq    Data format 
    
Metadata:
Assay:ChIP-seq
OutputType:fold_change_over_control
Sample:trophoblast_cell
genome:hg38
Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the assay type. Data were generated using various assay methods across many different sample types for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF