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     ENCFF008DNO_DNase-seq  ENCFF008DNO DNase-seq    Data format 
     ENCFF058IYI_H3K36me3  ENCFF058IYI H3K36me3    Data format 
     ENCFF064NJL_H3K9ac  ENCFF064NJL H3K9ac    Data format 
     ENCFF064YHT_DNase-seq  ENCFF064YHT DNase-seq    Data format 
     ENCFF084KPV_WGBS  ENCFF084KPV WGBS    Data format 
     ENCFF087SMW_H3K9ac  ENCFF087SMW H3K9ac    Data format 
     ENCFF089NNB_H3K27me3  ENCFF089NNB H3K27me3    Data format 
     ENCFF107RMQ_WGBS  ENCFF107RMQ WGBS    Data format 
     ENCFF118HQX_DNase-seq  ENCFF118HQX DNase-seq    Data format 
     ENCFF132HTK_polyA_plus_RNA-seq  ENCFF132HTK polyA_plus_RNA-seq    Data format 
     ENCFF135BIN_DNase-seq  ENCFF135BIN DNase-seq    Data format 
     ENCFF238VZG_DNase-seq  ENCFF238VZG DNase-seq    Data format 
     ENCFF257NLC_WGBS  ENCFF257NLC WGBS    Data format 
     ENCFF264LWT_H3K4me1  ENCFF264LWT H3K4me1    Data format 
     ENCFF281GOQ_DNase-seq  ENCFF281GOQ DNase-seq    Data format 
     ENCFF286IGG_H3K36me3  ENCFF286IGG H3K36me3    Data format 
     ENCFF321CLG_H3K4me1  ENCFF321CLG H3K4me1    Data format 
     ENCFF326FWY_DNase-seq  ENCFF326FWY DNase-seq    Data format 
     ENCFF362AGC_DNase-seq  ENCFF362AGC DNase-seq    Data format 
     ENCFF366DMT_H3K4me1  ENCFF366DMT H3K4me1    Data format 
     ENCFF379QDO_DNase-seq  ENCFF379QDO DNase-seq    Data format 
     ENCFF393DSO_polyA_plus_RNA-seq  ENCFF393DSO polyA_plus_RNA-seq    Data format 
     ENCFF411RQS_DNase-seq  ENCFF411RQS DNase-seq    Data format 
     ENCFF429LHD_DNase-seq  ENCFF429LHD DNase-seq    Data format 
     ENCFF452QHK_H3K4me1  ENCFF452QHK H3K4me1    Data format 
     ENCFF458XQS_polyA_plus_RNA-seq  ENCFF458XQS polyA_plus_RNA-seq    Data format 
     ENCFF461COG_DNase-seq  ENCFF461COG DNase-seq    Data format 
     ENCFF509TTX_DNase-seq  ENCFF509TTX DNase-seq    Data format 
     ENCFF513OZY_H3K4me3  ENCFF513OZY H3K4me3    Data format 
     ENCFF523QJV_H3K9me3  ENCFF523QJV H3K9me3    Data format 
     ENCFF524ELS_DNase-seq  ENCFF524ELS DNase-seq    Data format 
     ENCFF538UNW_H3K9ac  ENCFF538UNW H3K9ac    Data format 
     ENCFF567OUR_DNase-seq  ENCFF567OUR DNase-seq    Data format 
     ENCFF578BYR_polyA_plus_RNA-seq  ENCFF578BYR polyA_plus_RNA-seq    Data format 
     ENCFF594XOS_H3K4me1  ENCFF594XOS H3K4me1    Data format 
     ENCFF600KYB_H3K9me3  ENCFF600KYB H3K9me3    Data format 
     ENCFF604EJP_DNase-seq  ENCFF604EJP DNase-seq    Data format 
     ENCFF607VCM_H3K9ac  ENCFF607VCM H3K9ac    Data format 
     ENCFF623ANQ_H3K9me3  ENCFF623ANQ H3K9me3    Data format 
     ENCFF638ZNV_H3K36me3  ENCFF638ZNV H3K36me3    Data format 
     ENCFF639BWZ_polyA_plus_RNA-seq  ENCFF639BWZ polyA_plus_RNA-seq    Data format 
     ENCFF650XMH_H3K4me3  ENCFF650XMH H3K4me3    Data format 
     ENCFF662PIX_H3K4me3  ENCFF662PIX H3K4me3    Data format 
     ENCFF665DKU_H3K27me3  ENCFF665DKU H3K27me3    Data format 
     ENCFF673FBL_DNase-seq  ENCFF673FBL DNase-seq    Data format 
     ENCFF688KQB_H3K36me3  ENCFF688KQB H3K36me3    Data format 
     ENCFF750JAY_DNase-seq  ENCFF750JAY DNase-seq    Data format 
     ENCFF782WKY_DNase-seq  ENCFF782WKY DNase-seq    Data format 
     ENCFF795DJP_H3K27me3  ENCFF795DJP H3K27me3    Data format 
     ENCFF796RRM_polyA_plus_RNA-seq  ENCFF796RRM polyA_plus_RNA-seq    Data format 
     ENCFF802UAF_DNase-seq  ENCFF802UAF DNase-seq    Data format 
     ENCFF830YPS_H3K9me3  ENCFF830YPS H3K9me3    Data format 
     ENCFF848SZN_H3K27me3  ENCFF848SZN H3K27me3    Data format 
     ENCFF851MCI_DNase-seq  ENCFF851MCI DNase-seq    Data format 
     ENCFF854MAD_DNase-seq  ENCFF854MAD DNase-seq    Data format 
     ENCFF864KLB_H3K4me3  ENCFF864KLB H3K4me3    Data format 
     ENCFF873OEN_polyA_plus_RNA-seq  ENCFF873OEN polyA_plus_RNA-seq    Data format 
     ENCFF881ZMX_DNase-seq  ENCFF881ZMX DNase-seq    Data format 
     ENCFF915OOI_DNase-seq  ENCFF915OOI DNase-seq    Data format 
     ENCFF925KAJ_DNase-seq  ENCFF925KAJ DNase-seq    Data format 
     ENCFF965PJE_H3K4me1  ENCFF965PJE H3K4me1    Data format 
     ENCFF966NUA_DNase-seq  ENCFF966NUA DNase-seq    Data format 
     ENCFF983QYH_polyA_plus_RNA-seq  ENCFF983QYH polyA_plus_RNA-seq    Data format 
    
Metadata:
Assay:WGBS
OutputType:signal
Sample:H9
genome:hg38
Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the sample type. Data were generated using various assay methods for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF