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     ENCFF019HTA_H3K9me3  ENCFF019HTA H3K9me3    Data format 
     ENCFF035AKJ_H3K36me3  ENCFF035AKJ H3K36me3    Data format 
     ENCFF036RHZ_H3K36me3  ENCFF036RHZ H3K36me3    Data format 
     ENCFF212DLY_H3K4me1  ENCFF212DLY H3K4me1    Data format 
     ENCFF212RTG_H3K9me3  ENCFF212RTG H3K9me3    Data format 
     ENCFF230MBP_H3K4me3  ENCFF230MBP H3K4me3    Data format 
     ENCFF242FYC_H3K4me1  ENCFF242FYC H3K4me1    Data format 
     ENCFF295DSB_H3K27me3  ENCFF295DSB H3K27me3    Data format 
     ENCFF297ZVT_H3K36me3  ENCFF297ZVT H3K36me3    Data format 
     ENCFF336XON_H3K4me3  ENCFF336XON H3K4me3    Data format 
     ENCFF365DWT_H3K27me3  ENCFF365DWT H3K27me3    Data format 
     ENCFF366OKB_H3K27me3  ENCFF366OKB H3K27me3    Data format 
     ENCFF379TVH_H3K4me1  ENCFF379TVH H3K4me1    Data format 
     ENCFF399MVP_H3K27me3  ENCFF399MVP H3K27me3    Data format 
     ENCFF537QCF_H3K36me3  ENCFF537QCF H3K36me3    Data format 
     ENCFF565YIE_H3K9me3  ENCFF565YIE H3K9me3    Data format 
     ENCFF606GTH_H3K4me3  ENCFF606GTH H3K4me3    Data format 
     ENCFF777GYB_H3K9me3  ENCFF777GYB H3K9me3    Data format 
     ENCFF891PZS_H3K4me3  ENCFF891PZS H3K4me3    Data format 
    
Metadata:
Assay:polyA_plus_RNA-seq
OutputType:minus_strand_signal_of_all_reads
Sample:neurosphere
genome:hg38
Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the sample type. Data were generated using various assay methods for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF