By Assay H4K12ac Track Settings
 
H4K12ac tracks

Track collection: Roadmap data by assay

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 Configure 		 trophoblast cell  ENCFF025FOT ChIP-seq H4K12ac    Data format 
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 trophoblast cell  ENCFF110LWL ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF115DSH ChIP-seq H4K12ac    Data format 
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 trophoblast cell  ENCFF116EDY ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF310PYU ChIP-seq H4K12ac    Data format 
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 trophoblast cell  ENCFF328BNB ChIP-seq H4K12ac    Data format 
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 trophoblast cell  ENCFF332HUR ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF448AJZ ChIP-seq H4K12ac    Data format 
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 trophoblast cell  ENCFF487NFI ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF493FUQ ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF553KPV ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF583NJY ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF610MTE ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF686OEQ ChIP-seq H4K12ac    Data format 
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 trophoblast cell  ENCFF714MHP ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF719BQI ChIP-seq H4K12ac    Data format 
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 trophoblast cell  ENCFF734RIZ ChIP-seq H4K12ac    Data format 
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 trophoblast cell  ENCFF753VIT ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF989FOZ ChIP-seq H4K12ac    Data format 
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 Configure 		 trophoblast cell  ENCFF989KCN ChIP-seq H4K12ac    Data format 
    
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the assay type. Data were generated using various assay methods across many different sample types for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF