By Sample regulatory_T_cell Track Settings
 
regulatory_T_cell tracks

Track collection: Roadmap data by sample

+  Description
+  All tracks in this collection (133)

Maximum display mode:       Reset to defaults   
Select views (Help):
Coverage ▾      
Select subtracks by assay type:
  Assay Type ChIP-seq 
List subtracks: only selected/visible    all    ()
  Assay Type↓1   Track Name↓2  
dense
 ChIP-seq  ENCFF068XRQ regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF076GVX regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF159UNP regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF178OTF regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF250RDO regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF254ZAE regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF295NIY regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF309BKK regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF316THR regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF320HHE regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF337OCV regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF385BPH regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF425QYR regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF516NRP regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF541KHG regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF564MDP regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF568KUW regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF624ROH regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF679TRB regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF706HRP regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF709FUJ regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF774YSJ regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF814OIQ regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF852KTQ regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF893YKF regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF913NYR regulatory_T_cell ChIP-seq    Data format 
dense
 ChIP-seq  ENCFF918YYI regulatory_T_cell ChIP-seq    Data format 
dense
 Configure 		 ChIP-seq  ENCFF978UBB regulatory_T_cell ChIP-seq    Data format 
    
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the sample type. Data were generated using various assay methods for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF