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DNase Hypersensitivity Raw Signal

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Coverage

Select subtracks by output type and sample type:

All	*output type*	read-depth normalized signal	peaks	hotspots	footprints	FDR cut rate
*Sample Type*
left renal pelvis
large intestine
kidney
testis
fibroblast of skin of left quadriceps
left lung
stomach
CD14-positive monocyte
spleen
fibroblast of skin of abdomen
spinal cord
renal cortex interstitium
small intestine
T-cell
natural killer cell
muscle of back
lung
thymus
foreskin fibroblast
right kidney
fibroblast of upper back skin
brain
iPS DF 19.11
heart
muscle of arm
renal pelvis
right renal pelvis
left kidney
pancreas
right lung
B cell
neuronal stem cell
left renal cortex interstitium
trophoblast cell
placenta
fibroblast of skin of right quadriceps
adrenal gland
iPS DF 4.7
muscle of leg
foreskin keratinocyte
mesendoderm
fibroblast of skin of scalp
foreskin melanocyte
muscle of trunk
skin of body
ovary
right renal cortex interstitium
mammary epithelial cell
fibroblast of skin of back
forelimb muscle
hindlimb muscle
iPS DF 6.9
psoas muscle
hematopoietic multipotent progenitor cell
IMR-90
fibroblast of skin of left biceps
fibroblast of skin of right biceps
iPS DF 19.7
mesenchymal stem cell
*Sample Type*
All	*output type*	read-depth normalized signal	peaks	hotspots	footprints	FDR cut rate

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Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays genomic maps generated by DNase-seq (DNase I hypersensitive sites sequencing) for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in John Stamatoyannopoulos Lab at University of Washington.