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Database: panTro1 Primary Table: xenoMrna Row Count: 7,188,682   Data last updated: 2016-02-16
On download server: MariaDB table dump directory
field | example | SQL type |
bin | 585 | smallint(5) unsigned |
matches | 2285 | int(10) unsigned |
misMatches | 59 | int(10) unsigned |
repMatches | 0 | int(10) unsigned |
nCount | 0 | int(10) unsigned |
qNumInsert | 2 | int(10) unsigned |
qBaseInsert | 214 | int(10) unsigned |
tNumInsert | 16 | int(10) unsigned |
tBaseInsert | 620 | int(10) unsigned |
strand | ++ | char(2) |
qName | AK093685 | varchar(255) |
qSize | 3101 | int(10) unsigned |
qStart | 543 | int(10) unsigned |
qEnd | 3101 | int(10) unsigned |
tName | chr1 | varchar(255) |
tSize | 229575298 | int(10) unsigned |
tStart | 1332 | int(10) unsigned |
tEnd | 4296 | int(10) unsigned |
blockCount | 17 | int(10) unsigned |
blockSizes | 42,90,435,474,26,143,398,14... | longblob |
qStarts | 543,784,874,1309,1783,1809,... | longblob |
tStarts | 1332,1573,1664,2483,2959,29... | longblob |
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Connected Tables and Joining Fields
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Sample Rows
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bin | matches | misMatches | repMatches | nCount | qNumInsert | qBaseInsert | tNumInsert | tBaseInsert | strand | qName | qSize | qStart | qEnd | tName | tSize | tStart | tEnd | blockCount | blockSizes | qStarts | tStarts |
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585 | 2285 | 59 | 0 | 0 | 2 | 214 | 16 | 620 | ++ | AK093685 | 3101 | 543 | 3101 | chr1 | 229575298 | 1332 | 4296 | 17 | 42,90,435,474,26,143,398,141,265,7,25,12,15,9,6,3,253, | 543,784,874,1309,1783,1809,1952,2350,2491,2756,2763,2803,2815,2830,2839,2845,2848, | 1332,1573,1664,2483,2959,2986,3130,3530,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 2285 | 59 | 0 | 0 | 2 | 214 | 16 | 620 | ++ | AX748260 | 3101 | 543 | 3101 | chr1 | 229575298 | 1332 | 4296 | 17 | 42,90,435,474,26,143,398,141,265,7,25,12,15,9,6,3,253, | 543,784,874,1309,1783,1809,1952,2350,2491,2756,2763,2803,2815,2830,2839,2845,2848, | 1332,1573,1664,2483,2959,2986,3130,3530,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 2662 | 74 | 0 | 0 | 3 | 215 | 12 | 231 | ++ | AK125998 | 3453 | 502 | 3453 | chr1 | 229575298 | 1332 | 4299 | 14 | 42,90,570,895,541,265,7,25,12,15,9,6,3,256, | 502,743,833,1404,2299,2840,3105,3112,3152,3164,3179,3188,3194,3197, | 1332,1573,1664,2234,3130,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 2091 | 54 | 0 | 0 | 1 | 15 | 14 | 420 | ++ | AK057285 | 2160 | 0 | 2160 | chr1 | 229575298 | 1734 | 4299 | 15 | 365,474,26,143,398,141,265,7,25,12,15,9,6,3,256, | 0,365,839,865,1008,1406,1547,1812,1819,1859,1871,1886,1895,1901,1904, | 1734,2483,2959,2986,3130,3530,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 1610 | 35 | 0 | 0 | 1 | 15 | 13 | 920 | ++ | AM992870 | 1660 | 0 | 1660 | chr1 | 229575298 | 1734 | 4299 | 14 | 365,109,34,398,141,265,7,25,12,15,9,6,3,256, | 0,365,474,508,906,1047,1312,1319,1359,1371,1386,1395,1401,1404, | 1734,2483,3095,3130,3530,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 1556 | 32 | 0 | 0 | 1 | 15 | 12 | 914 | ++ | AM992877 | 1604 | 0 | 1603 | chr1 | 229575298 | 1745 | 4247 | 13 | 354,109,38,541,265,7,25,12,15,9,6,3,204, | 0,354,463,501,1042,1307,1314,1354,1366,1381,1390,1396,1399, | 1745,2483,3091,3130,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 1396 | 28 | 0 | 0 | 1 | 15 | 11 | 1078 | ++ | AM992881 | 1440 | 0 | 1439 | chr1 | 229575298 | 1745 | 4247 | 12 | 354,127,397,265,7,25,12,15,9,6,3,204, | 0,354,481,878,1143,1150,1190,1202,1217,1226,1232,1235, | 1745,2465,3274,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 1499 | 31 | 0 | 0 | 1 | 15 | 14 | 974 | ++ | AM992878 | 1545 | 0 | 1545 | chr1 | 229575298 | 1745 | 4249 | 15 | 354,52,38,398,141,158,106,7,25,12,15,9,6,3,206, | 0,354,406,444,842,983,1141,1247,1254,1294,1306,1321,1330,1336,1339, | 1745,2516,3091,3130,3530,3673,3832,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 1554 | 36 | 0 | 0 | 1 | 15 | 12 | 914 | ++ | AM992879 | 1605 | 0 | 1605 | chr1 | 229575298 | 1745 | 4249 | 13 | 354,109,38,541,265,7,25,12,15,9,6,3,206, | 0,354,463,501,1042,1307,1314,1354,1366,1381,1390,1396,1399, | 1745,2483,3091,3130,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
585 | 1603 | 34 | 0 | 0 | 1 | 15 | 12 | 914 | ++ | AM992871 | 1652 | 0 | 1652 | chr1 | 229575298 | 1745 | 4296 | 13 | 354,109,38,541,265,7,25,12,15,9,6,3,253, | 0,354,463,501,1042,1307,1314,1354,1366,1381,1390,1396,1399, | 1745,2483,3091,3130,3673,3939,3948,3992,4005,4022,4032,4039,4043, |
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Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
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