Schema for affyExonTissuesGsMedianDistRgdGene2
  Database: rn4    Primary Table: affyExonTissuesGsMedianDistRgdGene2    Row Count: 18,155,000   Data last updated: 2010-10-26
Format description: Abstract distance between two genes
On download server: MariaDB table dump directory
fieldexampleSQL type description
query RGD:1596944varchar(255) Query gene. Indexed
target RGD:1596944varchar(255) Target gene. Not indexed
distance 0float Distance between two, possibly in some expression space

Connected Tables and Joining Fields
        rn4.affyExonTissuesGsMedianRgdGene2.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.affyExonTissuesGsRgdGene2.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.ceBlastTab.query (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.dmBlastTab.query (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.drBlastTab.query (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.gnfAtlas2RgdGene2Distance.query (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.gnfAtlas2RgdGene2Distance.target (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.hgBlastTab.query (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.mmBlastTab.query (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2BlastTab.query (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2BlastTab.target (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2Canonical.transcript (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2Isoforms.transcript (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2KeggPathway.rgdId (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2Pep.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToDescription.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToDisplayId.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToEnsembl.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToGenbank.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToGenbankAll.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToGnfAtlas2.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToKeggEntrez.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToLocusLink.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToPDB.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToPfam.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToRAE230.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToRefSeq.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToSymbol.rgdId (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToU34A.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2ToUniProt.name (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGene2Xref.rgdGeneId (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.rgdGenePathway.geneId (via affyExonTissuesGsMedianDistRgdGene2.query)
      rn4.scBlastTab.query (via affyExonTissuesGsMedianDistRgdGene2.query)

Sample Rows
 
querytargetdistance
RGD:1596944RGD:15969440
RGD:1596944RGD:23215510.03
RGD:1596944RGD:13343790.034545
RGD:1596944RGD:23186940.034636
RGD:1596944RGD:15658920.037545
RGD:1596944RGD:13329210.037727
RGD:1596944RGD:15612230.037818
RGD:1596944RGD:13337030.039182
RGD:1596944RGD:15628780.039636
RGD:1596944RGD:13110390.040818

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.