Schema for drBlastTab
  Database: dm2    Primary Table: drBlastTab    Row Count: 5,253   Data last updated: 2007-04-03
Format description: Blast alignments of Zebrafish genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
query CG10354-RAvarchar(255) values Name of sequence in this assembly (query)
target ENSDART00000018701varchar(255) values Name of sequence in other assembly (target)
identity 64.23float range Percent identity
aliLength 478int(10) unsigned range Length of alignment
mismatch 164int(10) unsigned range Number of mismatches
gapOpen 6int(10) unsigned range Number of gap openings
qStart 0int(10) unsigned range Start in query (0 based)
qEnd 474int(10) unsigned range End in query (non-inclusive)
tStart 0int(10) unsigned range Start in target (0 based)
tEnd 475int(10) unsigned range End in target (non-inclusive)
eValue 9e-173double range Expectation value
bitScore 604double range Bit score

Connected Tables and Joining Fields
        dm2.arbExpDistance.query (via drBlastTab.query)
      dm2.arbExpDistance.target (via drBlastTab.query)
      dm2.ceBlastTab.query (via drBlastTab.query)
      dm2.flyBase2004Xref.name (via drBlastTab.query)
      dm2.flyBaseBlastTab.query (via drBlastTab.query)
      dm2.flyBaseBlastTab.target (via drBlastTab.query)
      dm2.flyBaseCanonical.transcript (via drBlastTab.query)
      dm2.flyBaseGene.name (via drBlastTab.query)
      dm2.flyBaseIsoforms.transcript (via drBlastTab.query)
      dm2.flyBaseNoncoding.name (via drBlastTab.query)
      dm2.flyBasePep.name (via drBlastTab.query)
      dm2.flyBaseToCG.name (via drBlastTab.query)
      dm2.flyBaseToDescription.name (via drBlastTab.query)
      dm2.flyBaseToPfam.name (via drBlastTab.query)
      dm2.flyBaseToRefSeq.name (via drBlastTab.query)
      dm2.flyBaseToUniProt.name (via drBlastTab.query)
      dm2.flyP2P.query (via drBlastTab.query)
      dm2.flyP2P.target (via drBlastTab.query)
      dm2.hgBlastTab.query (via drBlastTab.query)
      dm2.mmBlastTab.query (via drBlastTab.query)
      dm2.rnBlastTab.query (via drBlastTab.query)
      dm2.scBlastTab.query (via drBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
CG10354-RAENSDART0000001870164.234781646047404759e-173604
CG9773-RAENSDART0000005921258.492127732923022149e-65243
CG13761-RBENSDART0000002806223.434312851037454304303e-34143
CG5826-RAENSDART0000004170066.4919463138232562486e-74273
CG14749-RAENSDART0000005677332.2728218543656433996792e-40164
CG3408-RAENSDART0000000729644.38169902517111693e-35146
CG32555-RAENSDART0000005339133.14103264323310091010216e-159559
CG9333-RAENSDART0000005676336.49740446103075747333e-134476
CG6815-RAENSDART0000005126351.722619640253142533e-56217
CG33544-RAENSDART0000006408836.8114484213152201622e-1682

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.