Schema for hg17Kg
  Database: hg16    Primary Table: hg17Kg    Row Count: 37,182   Data last updated: 2005-06-30
Format description: A gene prediction.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name BC073913varchar(255) values Name of gene
chrom chr1varchar(255) values Reference sequence chromosome or scaffold
strand -char(1) values + or - for strand
txStart 4268int(10) unsigned range Transcription start position (or end position for minus strand item)
txEnd 7438int(10) unsigned range Transcription end position (or start position for minus strand item)
cdsStart 6607int(10) unsigned range Coding region start (or end position for minus strand item)
cdsEnd 7173int(10) unsigned range Coding region end (or start position for minus strand item)
exonCount 6int(10) unsigned range Number of exons
exonStarts 4268,4832,5658,6469,6720,7095,longblob   Exon start positions (or end positions for minus strand item)
exonEnds 4692,4901,5810,6628,6918,7438,longblob   Exon end positions (or start positions for minus strand item)

Connected Tables and Joining Fields
        hg16.bioCycPathway.kgID (via hg17Kg.name)
      hg16.dmBlastTab.query (via hg17Kg.name)
      hg16.drBlastTab.query (via hg17Kg.name)
      hg16.dupSpMrna.mrnaID (via hg17Kg.name)
      hg16.foldUtr3.name (via hg17Kg.name)
      hg16.foldUtr5.name (via hg17Kg.name)
      hg16.gnfAtlas2Distance.query (via hg17Kg.name)
      hg16.gnfAtlas2Distance.target (via hg17Kg.name)
      hg16.gnfU95Distance.query (via hg17Kg.name)
      hg16.gnfU95Distance.target (via hg17Kg.name)
      hg16.keggPathway.kgID (via hg17Kg.name)
      hg16.kgAlias.kgID (via hg17Kg.name)
      hg16.kgProtAlias.kgID (via hg17Kg.name)
      hg16.kgXref.kgID (via hg17Kg.name)
      hg16.knownBlastTab.query (via hg17Kg.name)
      hg16.knownBlastTab.target (via hg17Kg.name)
      hg16.knownCanonical.transcript (via hg17Kg.name)
      hg16.knownGene.name (via hg17Kg.name)
      hg16.knownGeneLink.name (via hg17Kg.name)
      hg16.knownGeneMrna.name (via hg17Kg.name)
      hg16.knownGenePep.name (via hg17Kg.name)
      hg16.knownIsoforms.transcript (via hg17Kg.name)
      hg16.knownToEnsembl.name (via hg17Kg.name)
      hg16.knownToGnfAtlas2.name (via hg17Kg.name)
      hg16.knownToHInv.name (via hg17Kg.name)
      hg16.knownToLocusLink.name (via hg17Kg.name)
      hg16.knownToPfam.name (via hg17Kg.name)
      hg16.knownToRefSeq.name (via hg17Kg.name)
      hg16.knownToSuper.gene (via hg17Kg.name)
      hg16.knownToU133.name (via hg17Kg.name)
      hg16.knownToU95.name (via hg17Kg.name)
      hg16.scBlastTab.query (via hg17Kg.name)
      knownGeneV39.bioCycPathway.kgID (via hg17Kg.name)
      knownGeneV39.ceBlastTab.query (via hg17Kg.name)
      knownGeneV39.dmBlastTab.query (via hg17Kg.name)
      knownGeneV39.drBlastTab.query (via hg17Kg.name)
      knownGeneV39.foldUtr3.name (via hg17Kg.name)
      knownGeneV39.foldUtr5.name (via hg17Kg.name)
      knownGeneV39.gnfAtlas2Distance.query (via hg17Kg.name)
      knownGeneV39.gnfAtlas2Distance.target (via hg17Kg.name)
      knownGeneV39.kgAlias.kgID (via hg17Kg.name)
      knownGeneV39.kgColor.kgID (via hg17Kg.name)
      knownGeneV39.kgProtAlias.kgID (via hg17Kg.name)
      knownGeneV39.kgSpAlias.kgID (via hg17Kg.name)
      knownGeneV39.kgTargetAli.qName (via hg17Kg.name)
      knownGeneV39.kgXref.kgID (via hg17Kg.name)
      knownGeneV39.knownAttrs.kgID (via hg17Kg.name)
      knownGeneV39.knownBlastTab.query (via hg17Kg.name)
      knownGeneV39.knownBlastTab.target (via hg17Kg.name)
      knownGeneV39.knownCanonical.protein (via hg17Kg.name)
      knownGeneV39.knownCanonical.transcript (via hg17Kg.name)
      knownGeneV39.knownCds.name (via hg17Kg.name)
      knownGeneV39.knownGene.name (via hg17Kg.name)
      knownGeneV39.knownGeneMrna.name (via hg17Kg.name)
      knownGeneV39.knownGenePep.name (via hg17Kg.name)
      knownGeneV39.knownIsoforms.transcript (via hg17Kg.name)
      knownGeneV39.knownToEnsembl.name (via hg17Kg.name)
      knownGeneV39.knownToGnfAtlas2.name (via hg17Kg.name)
      knownGeneV39.knownToHprd.name (via hg17Kg.name)
      knownGeneV39.knownToLocusLink.name (via hg17Kg.name)
      knownGeneV39.knownToMrna.name (via hg17Kg.name)
      knownGeneV39.knownToMrnaSingle.name (via hg17Kg.name)
      knownGeneV39.knownToMupit.name (via hg17Kg.name)
      knownGeneV39.knownToPfam.name (via hg17Kg.name)
      knownGeneV39.knownToRefSeq.name (via hg17Kg.name)
      knownGeneV39.knownToSuper.gene (via hg17Kg.name)
      knownGeneV39.knownToTag.name (via hg17Kg.name)
      knownGeneV39.knownToU133.name (via hg17Kg.name)
      knownGeneV39.knownToU95.name (via hg17Kg.name)
      knownGeneV39.knownToVisiGene.name (via hg17Kg.name)
      knownGeneV39.knownToWikipedia.name (via hg17Kg.name)
      knownGeneV39.mmBlastTab.query (via hg17Kg.name)
      knownGeneV39.rnBlastTab.query (via hg17Kg.name)
      knownGeneV39.scBlastTab.query (via hg17Kg.name)
      knownGeneV39.ucscScop.ucscId (via hg17Kg.name)

Sample Rows
 
namechromstrandtxStarttxEndcdsStartcdsEndexonCountexonStartsexonEnds
BC073913chr1-426874386607717364268,4832,5658,6469,6720,7095,4692,4901,5810,6628,6918,7438,
NM_182905chr1-455871734558717364558,4832,5658,6469,6719,7095,4692,4901,5810,6631,6918,7173,
AF346307chr1-24416259442500025599324416,25139,25583,25037,25344,25944,
NM_001005484chr1+58953598715895359871158953,59871,
NM_001005221chr1+4075214084604075214084601407521,408460,
NM_001005221chr1-6609586618976609586618971660958,661897,
AK097327chr1+7926137950777927527932322792613,793965,793445,795077,
NM_024796chr1-8014498027498019428024341801449,802749,
NM_017891chr1-92326295752792433092861610923262,925352,925918,927315,928576,928939,931790,932909,933428,957497,924425,925821,925944,927450,928642,929035,932812,933003,933541,957527,
AK000591chr1-92326295752992433093298110923262,925790,925918,927315,928576,928939,931790,932909,933428,957497,924425,925821,925944,927450,928642,929035,931866,933003,933541,957529,

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.