Schema for ucscRetroOrtho5
  Database: hg19    Primary Table: ucscRetroOrtho5    Row Count: 41,226   Data last updated: 2013-03-12
Format description: Orthlogy of retrogenes based on chains/nets with other species.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name A22930.1-6varchar(255) values Unique name of retrogene
db netCanFam3varchar(255) values database of other species
overlap 0int(11) range percent of retro that breaks net relative to other species

Connected Tables and Joining Fields
        hg19.ucscRetroAli5.qName (via ucscRetroOrtho5.name)
      hg19.ucscRetroExpressed5.name (via ucscRetroOrtho5.name)
      hg19.ucscRetroInfo5.name (via ucscRetroOrtho5.name)

Sample Rows
 
namedboverlap
A22930.1-6netCanFam30
A22930.1-6netMm100
A22930.1-6netRheMac30
A22938.1-19netCanFam399
A22938.1-19netMm1099
A22938.1-19netRheMac30
A22938.1-9netCanFam30
A22938.1-9netMm100
A22938.1-9netRheMac316
AB002312.2-4netCanFam30

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.