Schema for knownToVisiGene
  Database: hg19    Primary Table: knownToVisiGene    Row Count: 108,787   Data last updated: 2024-08-23
Format description: Map known gene to VisiGene image ids.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENST00000831201.1_1varchar(255) values Same as name field in known gene
value 179407varchar(255) values Image id
geneId 12172int(11) range Locus Link or other gene id

Connected Tables and Joining Fields
        hg19.bioCycPathway.kgID (via knownToVisiGene.name)
      hg19.ceBlastTab.query (via knownToVisiGene.name)
      hg19.dmBlastTab.query (via knownToVisiGene.name)
      hg19.drBlastTab.query (via knownToVisiGene.name)
      hg19.foldUtr3.name (via knownToVisiGene.name)
      hg19.foldUtr5.name (via knownToVisiGene.name)
      hg19.gnfAtlas2Distance.query (via knownToVisiGene.name)
      hg19.gnfAtlas2Distance.target (via knownToVisiGene.name)
      hg19.gnfU95Distance.query (via knownToVisiGene.name)
      hg19.gnfU95Distance.target (via knownToVisiGene.name)
      hg19.humanHprdP2P.query (via knownToVisiGene.name)
      hg19.humanHprdP2P.target (via knownToVisiGene.name)
      hg19.humanVidalP2P.query (via knownToVisiGene.name)
      hg19.humanVidalP2P.target (via knownToVisiGene.name)
      hg19.humanWankerP2P.query (via knownToVisiGene.name)
      hg19.humanWankerP2P.target (via knownToVisiGene.name)
      hg19.keggPathway.kgID (via knownToVisiGene.name)
      hg19.kgAlias.kgID (via knownToVisiGene.name)
      hg19.kgColor.kgID (via knownToVisiGene.name)
      hg19.kgProtAlias.kgID (via knownToVisiGene.name)
      hg19.kgProtMap2.qName (via knownToVisiGene.name)
      hg19.kgSpAlias.kgID (via knownToVisiGene.name)
      hg19.kgTargetAli.qName (via knownToVisiGene.name)
      hg19.kgTxInfo.name (via knownToVisiGene.name)
      hg19.kgXref.kgID (via knownToVisiGene.name)
      hg19.knownAttrs.kgID (via knownToVisiGene.name)
      hg19.knownBlastTab.query (via knownToVisiGene.name)
      hg19.knownBlastTab.target (via knownToVisiGene.name)
      hg19.knownCanonToDecipher.name (via knownToVisiGene.name)
      hg19.knownCanonical.transcript (via knownToVisiGene.name)
      hg19.knownCds.name (via knownToVisiGene.name)
      hg19.knownGene.name (via knownToVisiGene.name)
      hg19.knownGeneMrna.name (via knownToVisiGene.name)
      hg19.knownGenePep.name (via knownToVisiGene.name)
      hg19.knownGeneTxMrna.name (via knownToVisiGene.name)
      hg19.knownGeneTxPep.name (via knownToVisiGene.name)
      hg19.knownIsoforms.transcript (via knownToVisiGene.name)
      hg19.knownToAllenBrain.name (via knownToVisiGene.name)
      hg19.knownToDecipher.name (via knownToVisiGene.name)
      hg19.knownToEnsembl.name (via knownToVisiGene.name)
      hg19.knownToGnfAtlas2.name (via knownToVisiGene.name)
      hg19.knownToHInv.name (via knownToVisiGene.name)
      hg19.knownToHprd.name (via knownToVisiGene.name)
      hg19.knownToKeggEntrez.name (via knownToVisiGene.name)
      hg19.knownToLocusLink.name (via knownToVisiGene.name)
      hg19.knownToLynx.name (via knownToVisiGene.name)
      hg19.knownToMrna.name (via knownToVisiGene.name)
      hg19.knownToMrnaSingle.name (via knownToVisiGene.name)
      hg19.knownToMupit.name (via knownToVisiGene.name)
      hg19.knownToNextProt.name (via knownToVisiGene.name)
      hg19.knownToPfam.name (via knownToVisiGene.name)
      hg19.knownToRefSeq.name (via knownToVisiGene.name)
      hg19.knownToSuper.gene (via knownToVisiGene.name)
      hg19.knownToTag.name (via knownToVisiGene.name)
      hg19.knownToTreefam.name (via knownToVisiGene.name)
      hg19.knownToU133.name (via knownToVisiGene.name)
      hg19.knownToU133Plus2.name (via knownToVisiGene.name)
      hg19.knownToU95.name (via knownToVisiGene.name)
      hg19.knownToWikipedia.name (via knownToVisiGene.name)
      hg19.mmBlastTab.query (via knownToVisiGene.name)
      hg19.rnBlastTab.query (via knownToVisiGene.name)
      hg19.scBlastTab.query (via knownToVisiGene.name)
      hg19.ucscScop.ucscId (via knownToVisiGene.name)
      knownGeneV39.bioCycPathway.kgID (via knownToVisiGene.name)
      knownGeneV39.ceBlastTab.query (via knownToVisiGene.name)
      knownGeneV39.dmBlastTab.query (via knownToVisiGene.name)
      knownGeneV39.drBlastTab.query (via knownToVisiGene.name)
      knownGeneV39.foldUtr3.name (via knownToVisiGene.name)
      knownGeneV39.foldUtr5.name (via knownToVisiGene.name)
      knownGeneV39.gnfAtlas2Distance.query (via knownToVisiGene.name)
      knownGeneV39.gnfAtlas2Distance.target (via knownToVisiGene.name)
      knownGeneV39.kgAlias.kgID (via knownToVisiGene.name)
      knownGeneV39.kgColor.kgID (via knownToVisiGene.name)
      knownGeneV39.kgProtAlias.kgID (via knownToVisiGene.name)
      knownGeneV39.kgSpAlias.kgID (via knownToVisiGene.name)
      knownGeneV39.kgTargetAli.qName (via knownToVisiGene.name)
      knownGeneV39.kgXref.kgID (via knownToVisiGene.name)
      knownGeneV39.knownAttrs.kgID (via knownToVisiGene.name)
      knownGeneV39.knownBlastTab.query (via knownToVisiGene.name)
      knownGeneV39.knownBlastTab.target (via knownToVisiGene.name)
      knownGeneV39.knownCanonical.protein (via knownToVisiGene.name)
      knownGeneV39.knownCanonical.transcript (via knownToVisiGene.name)
      knownGeneV39.knownCds.name (via knownToVisiGene.name)
      knownGeneV39.knownGene.name (via knownToVisiGene.name)
      knownGeneV39.knownGeneMrna.name (via knownToVisiGene.name)
      knownGeneV39.knownGenePep.name (via knownToVisiGene.name)
      knownGeneV39.knownIsoforms.transcript (via knownToVisiGene.name)
      knownGeneV39.knownToEnsembl.name (via knownToVisiGene.name)
      knownGeneV39.knownToGnfAtlas2.name (via knownToVisiGene.name)
      knownGeneV39.knownToHprd.name (via knownToVisiGene.name)
      knownGeneV39.knownToLocusLink.name (via knownToVisiGene.name)
      knownGeneV39.knownToMrna.name (via knownToVisiGene.name)
      knownGeneV39.knownToMrnaSingle.name (via knownToVisiGene.name)
      knownGeneV39.knownToMupit.name (via knownToVisiGene.name)
      knownGeneV39.knownToPfam.name (via knownToVisiGene.name)
      knownGeneV39.knownToRefSeq.name (via knownToVisiGene.name)
      knownGeneV39.knownToSuper.gene (via knownToVisiGene.name)
      knownGeneV39.knownToTag.name (via knownToVisiGene.name)
      knownGeneV39.knownToU133.name (via knownToVisiGene.name)
      knownGeneV39.knownToU95.name (via knownToVisiGene.name)
      knownGeneV39.knownToVisiGene.name (via knownToVisiGene.name)
      knownGeneV39.knownToWikipedia.name (via knownToVisiGene.name)
      knownGeneV39.mmBlastTab.query (via knownToVisiGene.name)
      knownGeneV39.rnBlastTab.query (via knownToVisiGene.name)
      knownGeneV39.scBlastTab.query (via knownToVisiGene.name)
      knownGeneV39.ucscScop.ucscId (via knownToVisiGene.name)
      knownGeneV39.knownToVisiGene.value (via knownToVisiGene.value)
      visiGene.image.id (via knownToVisiGene.value)
      visiGene.imageProbe.image (via knownToVisiGene.value)

Sample Rows
 
namevaluegeneId
ENST00000831201.1_117940712172
ENST00000831165.1_117940712172
ENST00000831154.1_117940712172
ENST00000831157.1_117940712172
ENST00000831145.1_117940712172
ENST00000831146.1_117940712172
ENST00000831177.1_117940712172
ENST00000831172.1_117940712172
ENST00000831158.1_117940712172
ENST00000831206.1_117940712172

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.