Schema for dmBlastTab
  Database: ce6    Primary Table: dmBlastTab    Row Count: 4,665   Data last updated: 2010-08-19
Format description: Blast alignments of Drosophila genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
query C42D4.8varchar(255) values Name of sequence in this assembly (query)
target CG17209-RBvarchar(255) values Name of sequence in other assembly (target)
identity 51.09float range Percent identity
aliLength 1421int(10) unsigned range Length of alignment
mismatch 621int(10) unsigned range Number of mismatches
gapOpen 16int(10) unsigned range Number of gap openings
qStart 0int(10) unsigned range Start in query (0 based)
qEnd 1398int(10) unsigned range End in query (non-inclusive)
tStart 0int(10) unsigned range Start in target (0 based)
tEnd 1370int(10) unsigned range End in target (non-inclusive)
eValue 0double range Expectation value
bitScore 1303double range Bit score

Connected Tables and Joining Fields
        ce6.drBlastTab.query (via dmBlastTab.query)
      ce6.hgBlastTab.query (via dmBlastTab.query)
      ce6.kimExpDistance.query (via dmBlastTab.query)
      ce6.kimExpDistance.target (via dmBlastTab.query)
      ce6.mmBlastTab.query (via dmBlastTab.query)
      ce6.orfToGene.name (via dmBlastTab.query)
      ce6.rnBlastTab.query (via dmBlastTab.query)
      ce6.sangerBlastTab.query (via dmBlastTab.query)
      ce6.sangerBlastTab.target (via dmBlastTab.query)
      ce6.sangerCanonical.transcript (via dmBlastTab.query)
      ce6.sangerGene.name (via dmBlastTab.query)
      ce6.sangerGeneToWBGeneID.sangerGene (via dmBlastTab.query)
      ce6.sangerIsoforms.transcript (via dmBlastTab.query)
      ce6.sangerLinks.orfName (via dmBlastTab.query)
      ce6.sangerPep.name (via dmBlastTab.query)
      ce6.sangerToRefSeq.name (via dmBlastTab.query)
      ce6.scBlastTab.query (via dmBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
C42D4.8CG17209-RB51.09142162116013980137001303
T21H3.3CG8472-RB99.3314910014901497.000000000000001e-81295
F38A6.2CG42247-RD26.96649396192718882118142e-52204
F28C1.3bCG31635-RB31.913041876383411804656e-32136
F23H12.2CG7654-RA37.24145821414901362.9999999999999997e-2094.7
C02H7.3bCG5627-RA45.3150122381415962247204e-116416
F38A1.8CG2522-RA46.3965128412062406137e-143504
T26C5.3dCG9706-RB50.11467218480547725246e-110394
C46H3.2bCG12424-RB44.271317211993302573871e-27121
Y71H2B.10aCG12532-RA66.8195827450954091801144

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.