Schema for hgBlastTab
  Database: ce6    Primary Table: hgBlastTab    Row Count: 4,950   Data last updated: 2015-06-23
Format description: Blast alignments of Human genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
query C42D4.8varchar(255) values Name of sequence in this assembly (query)
target uc001jzn.4varchar(255) values Name of sequence in other assembly (target)
identity 57.21float range Percent identity
aliLength 1393int(10) unsigned range Length of alignment
mismatch 560int(10) unsigned range Number of mismatches
gapOpen 14int(10) unsigned range Number of gap openings
qStart 0int(10) unsigned range Start in query (0 based)
qEnd 1382int(10) unsigned range End in query (non-inclusive)
tStart 0int(10) unsigned range Start in target (0 based)
tEnd 1368int(10) unsigned range End in target (non-inclusive)
eValue 0double range Expectation value
bitScore 1467double range Bit score

Connected Tables and Joining Fields
        ce6.dmBlastTab.query (via hgBlastTab.query)
      ce6.drBlastTab.query (via hgBlastTab.query)
      ce6.kimExpDistance.query (via hgBlastTab.query)
      ce6.kimExpDistance.target (via hgBlastTab.query)
      ce6.mmBlastTab.query (via hgBlastTab.query)
      ce6.orfToGene.name (via hgBlastTab.query)
      ce6.rnBlastTab.query (via hgBlastTab.query)
      ce6.sangerBlastTab.query (via hgBlastTab.query)
      ce6.sangerBlastTab.target (via hgBlastTab.query)
      ce6.sangerCanonical.transcript (via hgBlastTab.query)
      ce6.sangerGene.name (via hgBlastTab.query)
      ce6.sangerGeneToWBGeneID.sangerGene (via hgBlastTab.query)
      ce6.sangerIsoforms.transcript (via hgBlastTab.query)
      ce6.sangerLinks.orfName (via hgBlastTab.query)
      ce6.sangerPep.name (via hgBlastTab.query)
      ce6.sangerToRefSeq.name (via hgBlastTab.query)
      ce6.scBlastTab.query (via hgBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
C42D4.8uc001jzn.457.21139356014013820136801467
T21H3.3uc002rvt.297.9914930014901492e-79291
F38A6.2uc001ygs.429.02665424162398881798122e-80299
F28C1.3auc021uvs.237.23505289967563355214e-82304
F23H12.2uc001hwl.438.9713676123159161459e-23104
C02H7.3buc009yln.235.85101849125389229877e-147520
F38A1.8uc001qdh.446.9366728014062406368e-139492
T26C5.3duc003fan.649.464652125775411015447e-112402
C46H3.2buc010wsc.441.481357811983334085423e-25114
Y71H2B.10auc002hjt.462.7196034170954094901107

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.