Schema for affyGnfU74CDistance
  Database: mm9    Primary Table: affyGnfU74CDistance    Row Count: 4,465,000   Data last updated: 2011-03-03
Format description: Abstract distance between two genes
On download server: MariaDB table dump directory
fieldexampleSQL type description
query uc007rsx.1varchar(255) Query gene. Indexed
target uc007rsy.1varchar(255) Target gene. Not indexed
distance 0float Distance between two, possibly in some expression space

Connected Tables and Joining Fields
        knownGeneV39.bioCycPathway.kgID (via affyGnfU74CDistance.query)
      knownGeneV39.ceBlastTab.query (via affyGnfU74CDistance.query)
      knownGeneV39.dmBlastTab.query (via affyGnfU74CDistance.query)
      knownGeneV39.drBlastTab.query (via affyGnfU74CDistance.query)
      knownGeneV39.foldUtr3.name (via affyGnfU74CDistance.query)
      knownGeneV39.foldUtr5.name (via affyGnfU74CDistance.query)
      knownGeneV39.gnfAtlas2Distance.query (via affyGnfU74CDistance.query)
      knownGeneV39.gnfAtlas2Distance.target (via affyGnfU74CDistance.query)
      knownGeneV39.kgAlias.kgID (via affyGnfU74CDistance.query)
      knownGeneV39.kgColor.kgID (via affyGnfU74CDistance.query)
      knownGeneV39.kgProtAlias.kgID (via affyGnfU74CDistance.query)
      knownGeneV39.kgSpAlias.kgID (via affyGnfU74CDistance.query)
      knownGeneV39.kgTargetAli.qName (via affyGnfU74CDistance.query)
      knownGeneV39.kgXref.kgID (via affyGnfU74CDistance.query)
      knownGeneV39.knownAttrs.kgID (via affyGnfU74CDistance.query)
      knownGeneV39.knownBlastTab.query (via affyGnfU74CDistance.query)
      knownGeneV39.knownBlastTab.target (via affyGnfU74CDistance.query)
      knownGeneV39.knownCanonical.protein (via affyGnfU74CDistance.query)
      knownGeneV39.knownCanonical.transcript (via affyGnfU74CDistance.query)
      knownGeneV39.knownCds.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownGene.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownGeneMrna.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownGenePep.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownIsoforms.transcript (via affyGnfU74CDistance.query)
      knownGeneV39.knownToEnsembl.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToGnfAtlas2.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToHprd.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToLocusLink.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToMrna.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToMrnaSingle.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToMupit.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToPfam.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToRefSeq.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToSuper.gene (via affyGnfU74CDistance.query)
      knownGeneV39.knownToTag.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToU133.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToU95.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToVisiGene.name (via affyGnfU74CDistance.query)
      knownGeneV39.knownToWikipedia.name (via affyGnfU74CDistance.query)
      knownGeneV39.mmBlastTab.query (via affyGnfU74CDistance.query)
      knownGeneV39.rnBlastTab.query (via affyGnfU74CDistance.query)
      knownGeneV39.scBlastTab.query (via affyGnfU74CDistance.query)
      knownGeneV39.ucscScop.ucscId (via affyGnfU74CDistance.query)
      mm9.affyGnfU74ADistance.query (via affyGnfU74CDistance.query)
      mm9.affyGnfU74ADistance.target (via affyGnfU74CDistance.query)
      mm9.affyGnfU74BDistance.query (via affyGnfU74CDistance.query)
      mm9.affyGnfU74BDistance.target (via affyGnfU74CDistance.query)
      mm9.bioCycPathway.kgID (via affyGnfU74CDistance.query)
      mm9.ccdsKgMap.geneId (via affyGnfU74CDistance.query)
      mm9.ceBlastTab.query (via affyGnfU74CDistance.query)
      mm9.dmBlastTab.query (via affyGnfU74CDistance.query)
      mm9.drBlastTab.query (via affyGnfU74CDistance.query)
      mm9.foldUtr3.name (via affyGnfU74CDistance.query)
      mm9.foldUtr5.name (via affyGnfU74CDistance.query)
      mm9.gnfAtlas2Distance.query (via affyGnfU74CDistance.query)
      mm9.gnfAtlas2Distance.target (via affyGnfU74CDistance.query)
      mm9.hgBlastTab.query (via affyGnfU74CDistance.query)
      mm9.keggPathway.kgID (via affyGnfU74CDistance.query)
      mm9.kgAlias.kgID (via affyGnfU74CDistance.query)
      mm9.kgColor.kgID (via affyGnfU74CDistance.query)
      mm9.kgProtAlias.kgID (via affyGnfU74CDistance.query)
      mm9.kgProtMap2.qName (via affyGnfU74CDistance.query)
      mm9.kgSpAlias.kgID (via affyGnfU74CDistance.query)
      mm9.kgTargetAli.qName (via affyGnfU74CDistance.query)
      mm9.kgTxInfo.name (via affyGnfU74CDistance.query)
      mm9.kgXref.kgID (via affyGnfU74CDistance.query)
      mm9.knownBlastTab.query (via affyGnfU74CDistance.query)
      mm9.knownBlastTab.target (via affyGnfU74CDistance.query)
      mm9.knownCanonical.protein (via affyGnfU74CDistance.query)
      mm9.knownCanonical.transcript (via affyGnfU74CDistance.query)
      mm9.knownGene.name (via affyGnfU74CDistance.query)
      mm9.knownGeneMrna.name (via affyGnfU74CDistance.query)
      mm9.knownGenePep.name (via affyGnfU74CDistance.query)
      mm9.knownIsoforms.transcript (via affyGnfU74CDistance.query)
      mm9.knownToAllenBrain.name (via affyGnfU74CDistance.query)
      mm9.knownToEnsembl.name (via affyGnfU74CDistance.query)
      mm9.knownToGnfAtlas2.name (via affyGnfU74CDistance.query)
      mm9.knownToKeggEntrez.name (via affyGnfU74CDistance.query)
      mm9.knownToLocusLink.name (via affyGnfU74CDistance.query)
      mm9.knownToPfam.name (via affyGnfU74CDistance.query)
      mm9.knownToRefSeq.name (via affyGnfU74CDistance.query)
      mm9.knownToSuper.gene (via affyGnfU74CDistance.query)
      mm9.knownToVisiGene.name (via affyGnfU74CDistance.query)
      mm9.rnBlastTab.query (via affyGnfU74CDistance.query)
      mm9.scBlastTab.query (via affyGnfU74CDistance.query)
      mm9.ucscScop.ucscId (via affyGnfU74CDistance.query)

Sample Rows
 
querytargetdistance
uc007rsx.1uc007rsy.10
uc007rsx.1uc011zeg.10
uc007rsx.1uc007rsx.10
uc007rsx.1uc007fab.10.589761
uc007rsx.1uc007fac.10.589761
uc007rsx.1uc011xdp.10.589761
uc007rsx.1uc007faa.20.589761
uc007rsx.1uc009rrc.10.643265
uc007rsx.1uc009rrb.10.643265
uc007rsx.1uc007cpc.10.65489

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.